diffbind

Here are 2 public repositories matching this topic...

challagandla / oracle-histone-chip

ORACLE histone ChIP-seq pipeline (Snakemake): QC, Bowtie2, MACS2 broad peaks, DiffBind differential binding, monaLisa/JASPAR motifs, deepTools, MultiQC (human/mouse/rat).

bioinformatics snakemake genomics computational-biology multiqc chip-seq histone-modifications epigenomics peak-calling deeptools diffbind oracle-platform motif-enrichment

Updated Jun 13, 2026
Python

Zaki-1052 / cleave

Star

Self-hosted CUT&RUN bioinformatics platform for the Ferguson Lab at UCSD. Replicates CUTANA Cloud and extends it with trimming, SEACR/MACS2, DiffBind, custom heatmaps, Pearson correlation, & Roman normalization. React + FastAPI + PostgreSQL on EC2.

react bioinformatics pipeline genomics postgresql igv chromatin epigenomics peak-calling fastapi diffbind cut-and-run

Updated Jun 15, 2026
Python

Improve this page

Add a description, image, and links to the diffbind topic page so that developers can more easily learn about it.

Curate this topic

Add this topic to your repo

To associate your repository with the diffbind topic, visit your repo's landing page and select "manage topics."

Learn more

Provide feedback

Saved searches

Use saved searches to filter your results more quickly