chore: fill derivable placeholders, drop false ARCHITECTURE, surface the rest

.github/CODEOWNERS

@@ -1,34 +1,4 @@
 # SPDX-License-Identifier: MPL-2.0
-# CODEOWNERS - Define code review assignments for GitHub
-# See: https://docs.github.com/en/repositories/managing-your-repositorys-settings-and-features/customizing-your-repository/about-code-owners
-
-# Default: sole maintainer for all files
-* @hyperpolymath
-
-# Security-sensitive files require explicit ownership
-SECURITY.md @hyperpolymath
-.github/workflows/ @hyperpolymath
-.machine_readable/ @hyperpolymath
-contractiles/ @hyperpolymath
-
-# License files
-LICENSE @hyperpolymath
-LICENSES/ @hyperpolymath
-
-# Configuration
-.gitignore @hyperpolymath
-.github/ @hyperpolymath
-
-# Documentation
-README* @hyperpolymath
-CONTRIBUTING* @hyperpolymath
-CODE_OF_CONDUCT* @hyperpolymath
-GOVERNANCE* @hyperpolymath
-MAINTAINERS* @hyperpolymath
-CHANGELOG* @hyperpolymath
-ROADMAP* @hyperpolymath
-
-# Build and CI
-Justfile @hyperpolymath
-Makefile @hyperpolymath
-*.sh @hyperpolymath
+# Solo-maintained hyperpolymath repo: no owner lines by policy.
+# See hyperpolymath/standards CODEOWNERS-POLICY.adoc (Rule 1).
+# Sole-maintainer review is moot; SPDX headers carry attribution.

.machine_readable/bot_directives/README.adoc

@@ -1,5 +1,5 @@
 // SPDX-License-Identifier: CC-BY-SA-4.0
-// Copyright (c) {{CURRENT_YEAR}} {{AUTHOR}} ({{OWNER}}) <{{AUTHOR_EMAIL}}>
+// Copyright (c) 2026 Jonathan D.A. Jewell (hyperpolymath) <j.d.a.jewell@open.ac.uk>
 = Agent Instructions
 :toc: preamble
 

.machine_readable/bot_directives/coverage.a2ml

@@ -1,5 +1,5 @@
 # SPDX-License-Identifier: MPL-2.0
-# Copyright (c) {{CURRENT_YEAR}} {{AUTHOR}} ({{OWNER}}) <{{AUTHOR_EMAIL}}>
+# Copyright (c) 2026 Jonathan D.A. Jewell (hyperpolymath) <j.d.a.jewell@open.ac.uk>
 #
 # coverage.a2ml — Session coverage tracking
 # Updated at the end of each AI agent session.
@@ -9,7 +9,7 @@
 
 [metadata]
 version = "1.0.0"
-last-updated = "{{CURRENT_DATE}}"
+last-updated = "2026-08-05"
 
 # ============================================================================
 # COVERAGE STATE

.machine_readable/bot_directives/debt.a2ml

@@ -1,5 +1,5 @@
 # SPDX-License-Identifier: MPL-2.0
-# Copyright (c) {{CURRENT_YEAR}} {{AUTHOR}} ({{OWNER}}) <{{AUTHOR_EMAIL}}>
+# Copyright (c) 2026 Jonathan D.A. Jewell (hyperpolymath) <j.d.a.jewell@open.ac.uk>
 #
 # debt.a2ml — Meander debt list
 # Things found but not fixed. Carried between sessions.
@@ -9,7 +9,7 @@
 
 [metadata]
 version = "1.0.0"
-last-updated = "{{CURRENT_DATE}}"
+last-updated = "2026-08-05"
 
 # ============================================================================
 # DEBT ITEMS

.machine_readable/bot_directives/methodology.a2ml

@@ -1,5 +1,5 @@
 # SPDX-License-Identifier: MPL-2.0
-# Copyright (c) {{CURRENT_YEAR}} {{AUTHOR}} ({{OWNER}}) <{{AUTHOR_EMAIL}}>
+# Copyright (c) 2026 Jonathan D.A. Jewell (hyperpolymath) <j.d.a.jewell@open.ac.uk>
 #
 # methodology.a2ml — AI agent methodology configuration
 # Declares how agents should approach work in this repository.
@@ -9,7 +9,7 @@
 
 [metadata]
 version = "1.0.0"
-last-updated = "{{CURRENT_DATE}}"
+last-updated = "2026-08-05"
 spec = "https://github.com/hyperpolymath/standards/blob/main/agentic-a2ml/docs/ADR-002-methodology-layer.adoc"
 
 # ============================================================================

.machine_readable/contractiles/dust/Dustfile.a2ml

@@ -54,7 +54,7 @@ to new repositories.
 - description: No references to julia-ecosystem in generic template files
 - run: test -z "$(grep -r 'julia-ecosystem' machine-readable-design/ 2>/dev/null)"
 - severity: warning
-- notes: Generic templates should use {{PROJECT_NAME}} or similar placeholders
+- notes: Generic templates should use Overview or similar placeholders
 
 ### version-sync-checked
 - description: Version in canonical-directory-structure matches .machine_readable/contractiles

0-AI-MANIFEST.a2ml

@@ -82,7 +82,7 @@ Entry points:
 2. **Single source of truth** - `.machine_readable/` is authoritative
 3. **No stale metadata** - If root state files exist, they are OUT OF DATE
 4. **License consistency** - All code MPL-2.0 unless platform requires MPL-2.0
-5. **Author attribution** - Always "{{AUTHOR}} <{{AUTHOR_EMAIL}}>"
+5. **Author attribution** - Always "Jonathan D.A. Jewell <j.d.a.jewell@open.ac.uk>"
 6. **Container images** - MUST use Chainguard base (`cgr.dev/chainguard/wolfi-base:latest` or `cgr.dev/chainguard/static:latest`)
 7. **Container runtime** - Podman, never Docker. Files are `Containerfile`, never `Dockerfile`
 8. **Container orchestration** - `selur-compose`, never `docker-compose`
@@ -126,3 +126,20 @@ This repo follows the **Dual-Track** architecture:
 ## ATTESTATION PROOF
 
 **"I have read the AI manifest. All machine-readable content (state files, anchors, policies, bot directives, contractiles, AI guides) is located in `.machine_readable/` ONLY, and community metadata is in `.github/`. I will not create duplicate files in the root directory."**
+
+<!-- BEGIN requires-initialisation -->
+
+## PRIORITY ACTION — this repository is not fully initialised
+
+32 substitution token(s) still have no value. **Read
+`REQUIRES_INITIALISATION.md` in the repository root before doing anything
+else here** — it lists every outstanding token, what it means, and which
+files it belongs in.
+
+Do not fabricate values for them, and do not delete the sections that
+contain them to quiet a gate. They are unfilled because they need a
+decision, not because they were overlooked. Resolve what you legitimately
+can, leave the rest, and delete `REQUIRES_INITIALISATION.md` only when
+nothing outstanding remains.
+
+<!-- END requires-initialisation -->

PROOF-NEEDS.md

@@ -4,7 +4,7 @@
 
 Template ABI removed -- was creating false impression of formal verification.
 The removed files (Types.idr, Layout.idr, Foreign.idr) contained only RSR template
-scaffolding with unresolved {{PROJECT}}/{{AUTHOR}} placeholders and no domain-specific proofs.
+scaffolding with unresolved JULIA_ECOSYSTEM/Jonathan D.A. Jewell placeholders and no domain-specific proofs.
 
 When this project needs formal ABI verification, create domain-specific Idris2 proofs
 following the pattern in repos like `typed-wasm`, `proven`, `echidna`, or `boj-server`.

QUICKSTART-MAINTAINER.adoc

@@ -1,6 +1,6 @@
 // SPDX-License-Identifier: CC-BY-SA-4.0
 // Template: QUICKSTART-MAINTAINER.adoc — packaging, deploying, and maintaining
-// Replace julia-ecosystem, {{PACKAGE_NAME}}, {{DEPS}} with actuals
+// Replace julia-ecosystem, julia-ecosystem, {{DEPS}} with actuals
 = julia-ecosystem — Quick Start for Platform Maintainers
 :toc:
 :toclevels: 2
@@ -65,10 +65,10 @@ Files installed:
 | `$PREFIX/bin/`
 | Executables
 
-| `$PREFIX/share/{{PACKAGE_NAME}}/`
+| `$PREFIX/share/julia-ecosystem/`
 | Data files, assets
 
-| `$PREFIX/share/doc/{{PACKAGE_NAME}}/`
+| `$PREFIX/share/doc/julia-ecosystem/`
 | Documentation
 
 | `$PREFIX/share/applications/`
@@ -80,9 +80,9 @@ Files installed:
 
 == Configuration
 
-Default config location: `$XDG_CONFIG_HOME/{{PACKAGE_NAME}}/config.toml`
+Default config location: `$XDG_CONFIG_HOME/julia-ecosystem/config.toml`
 
-Fallback: `$HOME/.config/{{PACKAGE_NAME}}/config.toml`
+Fallback: `$HOME/.config/julia-ecosystem/config.toml`
 
 == Health Checks
 
@@ -102,7 +102,7 @@ just build-release
 just install --prefix=/usr/local
 ----
 
-Or via OPSM: `opsm update {{PACKAGE_NAME}}`
+Or via OPSM: `opsm update julia-ecosystem`
 
 == Security Notes
 
@@ -117,8 +117,8 @@ For deploying multiple instances (e.g., different users or tenants):
 
 [source,bash]
 ----
-just install --prefix=/opt/{{PACKAGE_NAME}}-instance1 --config=/etc/{{PACKAGE_NAME}}/instance1.toml
-just install --prefix=/opt/{{PACKAGE_NAME}}-instance2 --config=/etc/{{PACKAGE_NAME}}/instance2.toml
+just install --prefix=/opt/julia-ecosystem-instance1 --config=/etc/julia-ecosystem/instance1.toml
+just install --prefix=/opt/julia-ecosystem-instance2 --config=/etc/julia-ecosystem/instance2.toml
 ----
 
 Each instance has isolated config, data, and logs.