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fix: external metadata loading and geojson tracking - #8

Merged

Sergio-ote merged 9 commits into

devfrom

rule_improvement

Sep 9, 2026

Merged

fix: external metadata loading and geojson tracking#8
Sergio-ote merged 9 commits into
devfrom
rule_improvement

Commits on Aug 26, 2026
- Add geojson processing rule and script
  NazimMechkouri
  committed
  d68d39f
Commits on Aug 28, 2026
- Apply snakefmt formatting and fix trailing newline
  NazimMechkouri
  committed
  5fffd7e
- Fix: add missing _find_geojson helper in common.smk
  NazimMechkouri
  committed
  ca894d8
Commits on Sep 1, 2026
- Add pseudobulk aggregate and DE rules
  NazimMechkouri
  committed
  1600a1b
Commits on Sep 4, 2026
- Fix concatenation of AnnData objects with sample_batch
  Sergio-ote
  authored
  3d23c59
Commits on Sep 8, 2026
Commits on Sep 9, 2026
- fix: external metadata loading and geojson DAG
  Sergio-ote
  committed
  2f322e1