Skip to content

Update readActiwatchCount to handle behaviour upcoming data.table package release. #90

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Merged
vincentvanhees merged 2 commits into from
Mar 9, 2026
Merged

Update readActiwatchCount to handle behaviour upcoming data.table package release. #90

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
2 commits
Select commit Hold shift + click to select a range
743269b
fixes #89
vincentvanhees Mar 9, 2026
c3636d4
To avoid two PRs, also include minor edits to documentation related t…
vincentvanhees Mar 9, 2026
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
8 changes: 6 additions & 2 deletions NEWS.md
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,8 +1,12 @@
# Changes in version 1.0.? (release date:??-??-2026)

- Update readActiwatchCount to handle behaviour upcoming data.table package release. #89

# Changes in version 1.0.7 (release date:26-11-2025)

- Parmay Matrix:
- Fixed minor bug in the conversion of accelerometer and gyroscope readings #82
- Correct documentation for header structure of bin files in readParmayMatrix #83
- Correct documentation for header structure of binary files in readParmayMatrix #83
- Update Parmay matrix website in README and readParmayMatrix function documentation #87
- Enhanced robustness when reading partially corrupted files, valid data packets are now processed, while only corrupted sections are skipped #88

Expand All @@ -22,7 +26,7 @@

- Fitbit: Fix bug preventing the loading of a sequence of json files. #76

- Add functions for reading Parmay Tech Matrix sensor (bin/BIN files) with accelerometer, gyroscope, temperature, and heart rate #70.
- Add functions for reading Parmay Tech Matrix sensor (BIN files) with accelerometer, gyroscope, temperature, and heart rate #70.

# Changes in version 1.0.3 (release date:07-03-2025)

Expand Down
2 changes: 1 addition & 1 deletion R/readActiwatchCount.R
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -68,7 +68,7 @@ readActiwatchCount = function(filename = NULL,
index = index + 1
}
}
D = data.table::fread(input = filename, header = FALSE, sep = ",",
D = data.table::fread(input = filename, sep = ",",
skip = index, quote = quote, data.table = FALSE)
colnames(D)[1:2] = c("counts", "light")
lastCol = ncol(D)
Expand Down
2 changes: 1 addition & 1 deletion README.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -10,7 +10,7 @@ Brand | Device name | File extension | Data type | GGIRread function
Axivity Ltd https://axivity.com/ | AX3 and AX6 | .cwa | raw gravitational units |readAxivity
ActivInsights Ltd https://activinsights.com/ | GENEActiv Original and Sleep | .bin | raw gravitational units | readGENEActiv
Unilever Discover Ltd | Genea (no longer manufactured) | .bin | raw gravitational units | readGenea
Parmay Tech https://www.matrixwearable.net/ | Matrix | .bin, .BIN | raw gravitational units | readParmayMatrix
Parmay Tech https://www.matrixwearable.net/ | Matrix | .BIN | raw gravitational units | readParmayMatrix
ActiGraph | ??? | .csv | count data | readActigraphCount
Actiwatch | ??? | .csv and .awd | count data | readActiwatchCount
Actical | ??? | .csv | count data | readActicalCount
Expand Down
2 changes: 1 addition & 1 deletion man/readParmayMatrix.Rd
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -113,7 +113,7 @@
\references{
For more details on Matrix devices', see:
\url{https://www.matrixwearable.net/}
For additional details on Matrix bin/BIN files structure, please contact manufacturer:
For additional details on Matrix BIN files structure, please contact manufacturer:
\url{https://www.matrixwearable.net/#!/contact}
}
\seealso{
Expand Down
8 changes: 5 additions & 3 deletions tests/testthat/test_readActiwatchCount.R
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -14,8 +14,9 @@ test_that("Actiwatch csv is correctly read", {
})
test_that("Actiwatch awd is correctly read", {
file = system.file("testfiles/Actiwatch.AWD", package = "GGIRread")
D = readActiwatchCount(filename = file, timeformat = "%d-%b-%Y %H:%M:%S",
desiredtz = "Europe/Amsterdam")
expect_warning(D <- readActiwatchCount(filename = file, timeformat = "%d-%b-%Y %H:%M:%S",
desiredtz = "Europe/Amsterdam"),
regexp = "Detected 1 column names but the data has 3 columns*")
expect_equal(D$epochSize, 60)
expect_equal(format(D$startTime), "2009-10-01 17:00:00")
expect_equal(nrow(D$data), 329)
Expand All @@ -27,8 +28,9 @@ test_that("Actiwatch awd is correctly read", {

test_that("Actiwatch awd error correctly", {
file = system.file("testfiles/Actiwatch.AWD", package = "GGIRread")
expect_error(readActiwatchCount(filename = file,
expect_error(expect_warning(readActiwatchCount(filename = file,
timeformat = "%d-%m-%Y %H:%M:%S"),
regexp = "Detected 1 column names but the data has 3 columns*"),
regexp = "Time format*")

expect_error(readActiwatchCount(filename = "",
Expand Down
Loading