Search for toxin genes in Clostridioides difficile genome assemblies
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Updated
Sep 25, 2025 - Nextflow
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clostridioides-difficile
Here are 3 public repositories matching this topic...
A Nextflow pipeline for detection and quantification of Clostridioides difficile PaLoc / CdtLoc toxin genes and antimicrobial-resistance gene (ARG) profiling against the CARD database.
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Jul 7, 2026 - Nextflow
Tool to find mge (phages, plasmids, and transposons) in cdiff. Scripts that allow Clostyper to be run in slurm.
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Updated
Jul 31, 2023 - Python
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