A comprehensive suite of Python programs for 1- & 2-photon calcium imaging analysis. Best to use on a local server, with a GPU for faster processing and data stored on drive(s) separate from the root mount.
Documentation: https://thicclatka.github.io/CLAH_IA
CLAH Image Analysis provides tools for:
- 1- and 2-photon imaging analysis
- Motion correction and segmentation
- Cell registration
- Unit analysis
- Flesh out start up & set up scripts
- Add GUI/WA details to Documentation
- Change segDict_WA to FastAPI + typescript from streamlit
- Create docker file