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Increase max shards for nf-test on CI runners #20

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Merged
OlivierCoen merged 2 commits into from
Apr 8, 2026
Merged

Increase max shards for nf-test on CI runners #20

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1cb2b53
re-introduce tests commented to avoid "no disk space left" errros
OlivierCoen Apr 8, 2026
4999638
increase max shards from 7 to 10 for nf-tests
OlivierCoen Apr 8, 2026
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2 changes: 1 addition & 1 deletion .github/workflows/nf-test.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -50,7 +50,7 @@ jobs:
env:
NFT_VER: ${{ env.NFT_VER }}
with:
max_shards: 7
max_shards: 10

- name: debug
run: |
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8 changes: 2 additions & 6 deletions tests/default.nf.test
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Expand Up @@ -104,8 +104,7 @@ nextflow_pipeline {
}
}
*/
/*
// removed in CI because "No splace left on disk" error encountered

test("-profile test_accessions_only") {
tag "test_accessions_only"

Expand Down Expand Up @@ -165,7 +164,6 @@ nextflow_pipeline {
)
}
}
*/

test("-profile test_one_accession_low_gene_count") {
tag "test_one_accession_low_gene_count"
Expand All @@ -192,8 +190,7 @@ nextflow_pipeline {
)
}
}
/*
// removed in CI because "No splace left on disk" error encountered

test("-profile test_skip_id_mapping") {
tag "test_skip_id_mapping"

Expand All @@ -219,7 +216,6 @@ nextflow_pipeline {
)
}
}
*/

test("-profile test_dataset_custom_mapping_and_gene_length") {
tag "test_dataset_custom_mapping_and_gene_length"
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