seqsubmit/modules.json at dev · nf-core/seqsubmit · GitHub

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{
    "name": "nf-core/seqsubmit",
    "homePage": "https://github.com/nf-core/seqsubmit",
    "repos": {
        "https://github.com/nf-core/modules.git": {
            "modules": {
                "nf-core": {
                    "barrnap": {
                        "branch": "master",
                        "git_sha": "41dfa3f7c0ffabb96a6a813fe321c6d1cc5b6e46",
                        "installed_by": ["modules"]
                    },
                    "catpack/addnames": {
                        "branch": "master",
                        "git_sha": "1100099613c12e944931426f46f10b14c4a74b3d",
                        "installed_by": ["fasta_classify_catpack"]
                    },
                    "catpack/bins": {
                        "branch": "master",
                        "git_sha": "1100099613c12e944931426f46f10b14c4a74b3d",
                        "installed_by": ["fasta_classify_catpack"]
                    },
                    "catpack/contigs": {
                        "branch": "master",
                        "git_sha": "1100099613c12e944931426f46f10b14c4a74b3d",
                        "installed_by": ["fasta_classify_catpack"]
                    },
                    "catpack/download": {
                        "branch": "master",
                        "git_sha": "1100099613c12e944931426f46f10b14c4a74b3d",
                        "installed_by": ["fasta_classify_catpack"]
                    },
                    "catpack/prepare": {
                        "branch": "master",
                        "git_sha": "1100099613c12e944931426f46f10b14c4a74b3d",
                        "installed_by": ["fasta_classify_catpack"]
                    },
                    "catpack/summarise": {
                        "branch": "master",
                        "git_sha": "1100099613c12e944931426f46f10b14c4a74b3d",
                        "installed_by": ["fasta_classify_catpack"]
                    },
                    "checkm2/databasedownload": {
                        "branch": "master",
                        "git_sha": "81470b59ebadb3d01dcfcd37d44f88eb890f4851",
                        "installed_by": ["modules"]
                    },
                    "checkm2/predict": {
                        "branch": "master",
                        "git_sha": "81470b59ebadb3d01dcfcd37d44f88eb890f4851",
                        "installed_by": ["modules"]
                    },
                    "coverm/contig": {
                        "branch": "master",
                        "git_sha": "27e31681fdbf1e511257355a236037a8cd9c2b2e",
                        "installed_by": ["modules"]
                    },
                    "coverm/genome": {
                        "branch": "master",
                        "git_sha": "8583516e8bdf15b48539c085fea9db657e814a30",
                        "installed_by": ["modules"]
                    },
                    "fastavalidator": {
                        "branch": "master",
                        "git_sha": "41dfa3f7c0ffabb96a6a813fe321c6d1cc5b6e46",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/fastavalidator/fastavalidator.diff"
                    },
                    "multiqc": {
                        "branch": "master",
                        "git_sha": "af27af1be706e6a2bb8fe454175b0cdf77f47b49",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/multiqc/multiqc.diff"
                    },
                    "trnascanse": {
                        "branch": "master",
                        "git_sha": "41dfa3f7c0ffabb96a6a813fe321c6d1cc5b6e46",
                        "installed_by": ["modules"]
                    },
                    "untar": {
                        "branch": "master",
                        "git_sha": "447f7bc0fa41dfc2400c8cad4c0291880dc060cf",
                        "installed_by": ["fasta_classify_catpack"]
                    }
                }
            },
            "subworkflows": {
                "nf-core": {
                    "fasta_classify_catpack": {
                        "branch": "master",
                        "git_sha": "1e1d30d328949507ee5af79b7ff58b09738b8227",
                        "installed_by": ["subworkflows"],
                        "patch": "subworkflows/nf-core/fasta_classify_catpack/fasta_classify_catpack.diff"
                    },
                    "utils_nextflow_pipeline": {
                        "branch": "master",
                        "git_sha": "05954dab2ff481bcb999f24455da29a5828af08d",
                        "installed_by": ["subworkflows"]
                    },
                    "utils_nfcore_pipeline": {
                        "branch": "master",
                        "git_sha": "271e7fc14eb1320364416d996fb077421f3faed2",
                        "installed_by": ["subworkflows"]
                    },
                    "utils_nfschema_plugin": {
                        "branch": "master",
                        "git_sha": "4b406a74dc0449c0401ed87d5bfff4252fd277fd",
                        "installed_by": ["subworkflows"]
                    }
                }
            }
        }
    }
}