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Update DESCRIPTION
R-CMD-check-bioc
#89:
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Merge pull request #155 from SrenBlikdal/devel
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Update read.bedMethyl() and alpha version of implementation for working with 5hmC and 5mC in bsseq()
R-CMD-check-bioc
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fixing typo
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update to local.correct
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small fix to previous commit
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small fix to previous commit
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fixing an issue with local.correct=TRUE reported by Luke Morina
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Adding the MethylCounts-class man page
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adding documentation to MethylCounts and friends
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Merge pull request #154 from SrenBlikdal/devel
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Adapt likelihood functions to MethylCounts and update test, manuals, and examples (alpha version).
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updating github actions for devel
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updating github actions
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Merge pull request #153 from SrenBlikdal/devel
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Fix read.bedMethyl when strandCollapse=F and add alpha version of read.bedMethyl for output="MethylCounts"
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adding alpha version of MethylCounts
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merghing methylcount
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Making read.modkit and read.modbam2bed defunct
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merging from release
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Making strancCollapse compatible with MethylCounts
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initial run of MethylCounts
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initial work on MethylCounts
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getting rid of Travis since we have been using Github Actions for a w…
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deprecating read.modklit and read.modbam2bed
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