Hello,
I would like to know if the 1000G Phase 3 30x (GRCh38/hg38) [BETA] reference panel zip files are or will be available.
If not, could you please provide some guidelines on how the pre-processing steps should be done (filtering, etc.) in order to replicate them?
We created a reference panel following MIS documentation using the vcfs available here, however we are not reaching the same performance in a local docker installation.
Thank you in advance for the information!
Hello,
I would like to know if the 1000G Phase 3 30x (GRCh38/hg38) [BETA] reference panel zip files are or will be available.
If not, could you please provide some guidelines on how the pre-processing steps should be done (filtering, etc.) in order to replicate them?
We created a reference panel following MIS documentation using the vcfs available here, however we are not reaching the same performance in a local docker installation.
Thank you in advance for the information!