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10 changes: 5 additions & 5 deletions .github/workflows/docs.yml
Original file line number Diff line number Diff line change
Expand Up @@ -23,21 +23,21 @@ jobs:
runs-on: ubuntu-latest
timeout-minutes: 15
steps:
- uses: actions/checkout@11d5960a326750d5838078e36cf38b85af677262 # v4
- uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
with:
persist-credentials: false
- uses: astral-sh/setup-uv@e58605a9b6da7c637471fab8847a5e5a6b8df081 # v5
- uses: astral-sh/setup-uv@d4b2f3b6ecc6e67c4457f6d3e41ec42d3d0fcb86 # v5
with:
version: "0.11.24"
- name: Set up Python
uses: actions/setup-python@a26af69be951a213d495a4c3e4e4022e16d87065 # v5
uses: actions/setup-python@5fda3b95a4ea91299a34e894583c3862153e4b97 # v7.0.0
with:
python-version: "3.11"
- name: Build docs (strict)
run: uv run --frozen --group docs mkdocs build --strict
- name: Upload Pages artifact
if: github.ref == 'refs/heads/main'
uses: actions/upload-pages-artifact@56afc609e74202658d3ffba0e8f6dda462b719fa # v3
uses: actions/upload-pages-artifact@fc324d3547104276b827a68afc52ff2a11cc49c9 # v5.0.0
with:
path: site

Expand All @@ -56,4 +56,4 @@ jobs:
steps:
- name: Deploy to GitHub Pages
id: deployment
uses: actions/deploy-pages@d6db90164ac5ed86f2b6aed7e0febac5b3c0c03e # v4
uses: actions/deploy-pages@368f82528645a54fb793d4d04e342629a3f51346 # v5.0.1
10 changes: 5 additions & 5 deletions .github/workflows/release.yml
Original file line number Diff line number Diff line change
Expand Up @@ -27,24 +27,24 @@ jobs:
id-token: write
attestations: write
steps:
- uses: actions/checkout@11d5960a326750d5838078e36cf38b85af677262 # v4
- uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
with:
persist-credentials: false
- uses: actions/download-artifact@d3f86a106a0bac45b974a628896c90dbdf5c8093 # v4
- uses: actions/download-artifact@3e5f45b2cfb9172054b4087a40e8e0b5a5461e7c # v8.0.1
with:
name: trialmatchai-dist-${{ github.sha }}
path: dist/
- uses: actions/setup-python@a26af69be951a213d495a4c3e4e4022e16d87065 # v5
- uses: actions/setup-python@5fda3b95a4ea91299a34e894583c3862153e4b97 # v7.0.0
with:
python-version: "3.11"
- uses: astral-sh/setup-uv@e58605a9b6da7c637471fab8847a5e5a6b8df081 # v5
- uses: astral-sh/setup-uv@d4b2f3b6ecc6e67c4457f6d3e41ec42d3d0fcb86 # v5
with:
version: "0.11.24"
- name: Verify the tested artifacts
env:
PYTHONPATH: src
run: python -m trialmatchai artifacts verify dist/SHA256SUMS --require-exact --json
- uses: actions/attest-build-provenance@43d14bc2b83dec42d39ecae14e916627a18bb661 # v3
- uses: actions/attest-build-provenance@977bb373ede98d70efdf65b84cb5f73e068dcc2a # v3
with:
subject-path: |
dist/*.whl
Expand Down
38 changes: 19 additions & 19 deletions .github/workflows/verify.yml
Original file line number Diff line number Diff line change
Expand Up @@ -20,22 +20,22 @@ jobs:
HF_HUB_OFFLINE: "1"
TRANSFORMERS_OFFLINE: "1"
steps:
- uses: actions/checkout@11d5960a326750d5838078e36cf38b85af677262 # v4
- uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
with:
persist-credentials: false
- uses: astral-sh/setup-uv@e58605a9b6da7c637471fab8847a5e5a6b8df081 # v5
- uses: astral-sh/setup-uv@d4b2f3b6ecc6e67c4457f6d3e41ec42d3d0fcb86 # v5
with:
version: "0.11.24"
enable-cache: true
- uses: actions/setup-python@a26af69be951a213d495a4c3e4e4022e16d87065 # v5
- uses: actions/setup-python@5fda3b95a4ea91299a34e894583c3862153e4b97 # v7.0.0
with:
python-version: "3.11"
- run: uv sync --frozen
- run: uv lock --check
- run: uv run --frozen ruff check .
- run: uv run --frozen pre-commit run actionlint --all-files
- run: uv run --frozen pytest -v -m 'not e2e' --junitxml=test-results/unit.xml
- uses: actions/upload-artifact@ea165f8d65b6e75b540449e92b4886f43607fa02 # v4
- uses: actions/upload-artifact@043fb46d1a93c77aae656e7c1c64a875d1fc6a0a # v7.0.1
if: always()
with:
name: unit-results
Expand All @@ -46,14 +46,14 @@ jobs:
runs-on: ubuntu-latest
timeout-minutes: 20
steps:
- uses: actions/checkout@11d5960a326750d5838078e36cf38b85af677262 # v4
- uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
with:
persist-credentials: false
- uses: astral-sh/setup-uv@e58605a9b6da7c637471fab8847a5e5a6b8df081 # v5
- uses: astral-sh/setup-uv@d4b2f3b6ecc6e67c4457f6d3e41ec42d3d0fcb86 # v5
with:
version: "0.11.24"
enable-cache: true
- uses: actions/setup-python@a26af69be951a213d495a4c3e4e4022e16d87065 # v5
- uses: actions/setup-python@5fda3b95a4ea91299a34e894583c3862153e4b97 # v7.0.0
with:
python-version: "3.11"
- run: uv sync --frozen
Expand All @@ -65,14 +65,14 @@ jobs:
runs-on: ubuntu-latest
timeout-minutes: 25
steps:
- uses: actions/checkout@11d5960a326750d5838078e36cf38b85af677262 # v4
- uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
with:
persist-credentials: false
- uses: astral-sh/setup-uv@e58605a9b6da7c637471fab8847a5e5a6b8df081 # v5
- uses: astral-sh/setup-uv@d4b2f3b6ecc6e67c4457f6d3e41ec42d3d0fcb86 # v5
with:
version: "0.11.24"
enable-cache: true
- uses: actions/setup-python@a26af69be951a213d495a4c3e4e4022e16d87065 # v5
- uses: actions/setup-python@5fda3b95a4ea91299a34e894583c3862153e4b97 # v7.0.0
with:
python-version: "3.11"
- run: uv sync --frozen --extra entity
Expand Down Expand Up @@ -100,14 +100,14 @@ jobs:
runs-on: ubuntu-latest
timeout-minutes: 15
steps:
- uses: actions/checkout@11d5960a326750d5838078e36cf38b85af677262 # v4
- uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
with:
persist-credentials: false
- uses: astral-sh/setup-uv@e58605a9b6da7c637471fab8847a5e5a6b8df081 # v5
- uses: astral-sh/setup-uv@d4b2f3b6ecc6e67c4457f6d3e41ec42d3d0fcb86 # v5
with:
version: "0.11.24"
enable-cache: true
- uses: actions/setup-python@a26af69be951a213d495a4c3e4e4022e16d87065 # v5
- uses: actions/setup-python@5fda3b95a4ea91299a34e894583c3862153e4b97 # v7.0.0
with:
python-version: "3.11"
- run: uv sync --frozen
Expand Down Expand Up @@ -141,7 +141,7 @@ jobs:
- run: uv build --no-create-gitignore
- run: uv run --frozen trialmatchai artifacts manifest dist
- run: uv run --frozen trialmatchai artifacts verify dist/SHA256SUMS --require-exact --json
- uses: actions/upload-artifact@ea165f8d65b6e75b540449e92b4886f43607fa02 # v4
- uses: actions/upload-artifact@043fb46d1a93c77aae656e7c1c64a875d1fc6a0a # v7.0.1
with:
name: trialmatchai-dist-${{ github.sha }}
path: dist/
Expand All @@ -153,16 +153,16 @@ jobs:
runs-on: ubuntu-latest
timeout-minutes: 15
steps:
- uses: actions/checkout@11d5960a326750d5838078e36cf38b85af677262 # v4
- uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
with:
persist-credentials: false
- uses: astral-sh/setup-uv@e58605a9b6da7c637471fab8847a5e5a6b8df081 # v5
- uses: astral-sh/setup-uv@d4b2f3b6ecc6e67c4457f6d3e41ec42d3d0fcb86 # v5
with:
version: "0.11.24"
- uses: actions/setup-python@a26af69be951a213d495a4c3e4e4022e16d87065 # v5
- uses: actions/setup-python@5fda3b95a4ea91299a34e894583c3862153e4b97 # v7.0.0
with:
python-version: "3.11"
- uses: actions/download-artifact@d3f86a106a0bac45b974a628896c90dbdf5c8093 # v4
- uses: actions/download-artifact@3e5f45b2cfb9172054b4087a40e8e0b5a5461e7c # v8.0.1
with:
name: trialmatchai-dist-${{ github.sha }}
path: dist/
Expand All @@ -181,7 +181,7 @@ jobs:
cd "$RUNNER_TEMP/trialmatchai-smoke"
uv run --no-project --isolated --with "$WHEEL" python -I "$SMOKE_SCRIPT" \
--expect-installed --workspace "$RUNNER_TEMP/trialmatchai-smoke/workspace"
- uses: actions/upload-artifact@ea165f8d65b6e75b540449e92b4886f43607fa02 # v4
- uses: actions/upload-artifact@043fb46d1a93c77aae656e7c1c64a875d1fc6a0a # v7.0.1
if: failure()
with:
name: installed-cli-failure
Expand Down
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