Scripts for mapping and quality control of DEST dataset
populationInfo\: Has supplemental data from the DrosEU, DrosRTEC, and DPGP files to make a unified meta-datafile; attaches GHCND station based on lat. and long.
mappingPipeline\: Contains dockerized mapping pipeline. Downloads data, produces bam files, filter files, gSYNC files
add_DGN_datda\: Downloads, formats, lifts-over DGN data into gSYNC format
PoolSNP4Sync\: SNP calling based on gSYNC files
SNAPE\: SNP calling based on snape output
utility\: (a) download individual files; (b)