Support glob patterns in open_datatree(group=...) for selective group loading#3
Closed
aladinor wants to merge 1 commit intoasync-dtreecfrom
Closed
Support glob patterns in open_datatree(group=...) for selective group loading#3aladinor wants to merge 1 commit intoasync-dtreecfrom
open_datatree(group=...) for selective group loading#3aladinor wants to merge 1 commit intoasync-dtreecfrom
Conversation
… loading When the group parameter contains glob metacharacters (*, ?, [), filter which groups are opened instead of re-rooting the tree. This avoids loading the entire hierarchy when only a subset is needed. Adds shared utilities _is_glob_pattern, _filter_group_paths, and _resolve_group_and_filter in common.py. Updates NetCDF4, H5NetCDF, and Zarr backends to use the discover-filter-open pipeline. Includes unit tests for the utilities and integration tests across all backends. Closes pydata#11196
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
When the
groupparameter contains glob metacharacters (*,?,[), filter which groups are opened instead of re-rooting the tree. This avoids loading the entire hierarchy when only a subset is needed — useful for radar data (*/sweep_0) and CMIP archives (*/historical/tas).Adds shared utilities
_is_glob_pattern,_filter_group_paths, and_resolve_group_and_filterincommon.py. Updates NetCDF4, H5NetCDF, and Zarr backends to use a discover → filter → open pipeline. Uses the same matching engine asDataTree.match().open_datatree(group=...)for selective group loading pydata/xarray#11196whats-new.rstapi.rstStacked on pydata#10742