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1. HuttleyLab/PhyLim HuttleyLab/PhyLim Public

   Python project to validate a phylogenetic fitted models is within the limits of inference

   Python 20 2

2. iqtree/piqtree iqtree/piqtree Public

   A Python library that exposes features from IQ-TREE - efficient software for phylogenomic inference

   Python 49 9

3. cogent3-ete3 cogent3-ete3 Public

   A plugin for converting a cogent3 tree to ete3 tree object

   Python 6 1

4. Cogent3Workshop Cogent3Workshop Public

   Forked from cogent3/Cogent3Workshop

   Materials for the Phylomania workshop

   Jupyter Notebook 1

5. cogent3/cogent3 cogent3/cogent3 Public

   Comparative Genomics Toolkit 3

   Python 136 67

6. alignment-free-distance alignment-free-distance Public

   Jupyter Notebook 1