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fix(storage): compact retained history and reclaim orphan bodies #4718

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7508aa4
Reduce tool-history duplication and repair small retention payloads
ScriptedAlchemy Nov 3, 2026
233d808
build: consume Grafeo fork main without a downstream patch
ScriptedAlchemy Nov 3, 2026
2b611ba
fix(storage): compact retained evidence and reclaim orphan bodies
ScriptedAlchemy Nov 3, 2026
4aebbd3
test(storage): use SQLite integer types in vacuum regressions
ScriptedAlchemy Nov 3, 2026
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10 changes: 5 additions & 5 deletions Cargo.lock
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18 changes: 10 additions & 8 deletions Cargo.toml
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Expand Up @@ -81,14 +81,16 @@ asupersync = { git = "https://github.com/Dicklesworthstone/asupersync", rev = "e
# and in-place, page-verified sealed sections that sealed generation stores
# are built and reopened with. Its `memory_usage()` also counts the catalog,
# empty property-index shards and plan-cache tables, which the serving graph
# heap charge reads. The fork's workspace resolves sibling crates
# by path, so all five crates must name the same `rev`; mixed revisions build
# type-incompatible instances.
grafeo-adapters = { git = "https://github.com/ScriptedAlchemy/grafeo.git", rev = "be4713a5c2ee9df7e4639671c1e1244b7680f103", default-features = false, features = ["algos"] }
grafeo-common = { git = "https://github.com/ScriptedAlchemy/grafeo.git", rev = "be4713a5c2ee9df7e4639671c1e1244b7680f103", default-features = false }
grafeo-core = { git = "https://github.com/ScriptedAlchemy/grafeo.git", rev = "be4713a5c2ee9df7e4639671c1e1244b7680f103", default-features = false, features = ["lpg"] }
grafeo-engine = { git = "https://github.com/ScriptedAlchemy/grafeo.git", rev = "be4713a5c2ee9df7e4639671c1e1244b7680f103", default-features = false, features = ["lpg", "gql", "algos", "wal", "grafeo-file"] }
grafeo-storage = { git = "https://github.com/ScriptedAlchemy/grafeo.git", rev = "be4713a5c2ee9df7e4639671c1e1244b7680f103", default-features = false, features = ["wal"] }
# heap charge reads, and reports native read allocation demand before
# materializing rows. These APIs live in the fork so every build uses the
# same implementation. The fork resolves sibling crates by path: keep all
# five dependencies on main together and lock their exact commit in Cargo.lock
# to avoid type-incompatible instances from mixed sources.
grafeo-adapters = { git = "https://github.com/ScriptedAlchemy/grafeo.git", branch = "main", default-features = false, features = ["algos"] }
grafeo-common = { git = "https://github.com/ScriptedAlchemy/grafeo.git", branch = "main", default-features = false }
grafeo-core = { git = "https://github.com/ScriptedAlchemy/grafeo.git", branch = "main", default-features = false, features = ["lpg"] }
grafeo-engine = { git = "https://github.com/ScriptedAlchemy/grafeo.git", branch = "main", default-features = false, features = ["lpg", "gql", "algos", "wal", "grafeo-file"] }
grafeo-storage = { git = "https://github.com/ScriptedAlchemy/grafeo.git", branch = "main", default-features = false, features = ["wal"] }
# Pinned once: the MCP git handlers and the root's edit/lifecycle readers must
# resolve the same object database and status implementation, so a feature
# added for one is never missing for the other.
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7 changes: 0 additions & 7 deletions MODULE.bazel
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Expand Up @@ -103,13 +103,6 @@ crate.annotation(
version = "0.46.0",
)

crate.annotation(
crate = "grafeo-core",
patch_args = ["-p1"],
patches = ["//scripts:bazel/patches/grafeo-core-read-allocation.patch"],
version = "0.5.43",
)

# arborium grammar build scripts read `env!("CARGO_MANIFEST_DIR")`, which bakes
# the compiling output base's absolute path into the build-script binary. The
# action key does not include that path, so the disk cache served one output
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