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Fix paralog cross-hits silently dropping syntenic blocks (--best_hmm_wins) - #103

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Robaina merged 1 commit into

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fix-issue96-paralog-crosshits

Jun 19, 2026

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Fix paralog cross-hits silently dropping syntenic blocks (--best_hmm_wins)#103
Robaina merged 1 commit into
mainfrom
fix-issue96-paralog-crosshits

Commits on Jun 19, 2026
- Add --best_hmm_wins to fix paralog cross-hits dropping syntenic blocks (#96)
  
  Robaina
  and
  claude
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