QuackenbushLab
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NetworkDataCompanion
NetworkDataCompanion PublicAn R library of utilities for performing analyses on TCGA and GTEx data using the Network Zoo
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Repositories
- seahorse-networks Public
Code for running all-by-all correlations between network features (node targeting) and phenotypes
- artifactual-waves-of-aging Public
- BLOBFISH_paper_scripts Public
These are the scripts needed to replicate the results in the BLOBFISH paper.
- Profound_Autism_Paper_Scripts Public
Scripts needed to replicate the results for the paper evaluating the separability of profound autism from a genomics, transcriptomics, and regulomics perspective.
- Adebari_Glioma_scripts Public
Scripts used to replicate the results for the Adebari et al paper comparing sex differences in glioblastomas and low-grade gliomas.
- LOY_lung_cancer Public
Companion repository for our study on loss of Y chromosome (LOY) in lung cancer
- FERRET Public
Framework to Evaluate Robustness in Regulatory Networks Using Heterogeneous Cell Types
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