Skip to content
@QTIM-Lab

QTIM Lab

The Quantitative Translational Imaging in Medicine Lab at the Martinos Center (MGH/HST)

Popular repositories Loading

  1. DeepNeuro DeepNeuro Public

    A deep learning python package for neuroimaging data. Made by:

    Jupyter Notebook 129 40

  2. qtim_Tutorials qtim_Tutorials Public

    Jupyter notebooks and other tutorials for medical imaging and deep learning, courtesy of the QTIM lab.

    Jupyter Notebook 31 15

  3. SiameseChange SiameseChange Public

    Python 17 5

  4. qtim_ROP qtim_ROP Public

    Code base for preprocessing, segmentation and classification of retinal images

    Python 16 8

  5. qtim_tools qtim_tools Public

    A set of tools used for quantitative analysis of and machine learning from 3D medical images. Created by the Quantitative Tumor Imaging Lab at Martinos.

    HTML 12 5

  6. Assessing-Saliency-Maps Assessing-Saliency-Maps Public

    Python 11 2

Repositories

Showing 10 of 135 repositories
  • CorisDB_Curation Public

    Repo for organizing the db scheme of our coris_db

    QTIM-Lab/CorisDB_Curation’s past year of commit activity
    Jupyter Notebook 0 MIT 1 0 0 Updated Feb 12, 2026
  • aireadi_fovea_annotation Public

    aireadi_fovea_annotation app for ground truths

    QTIM-Lab/aireadi_fovea_annotation’s past year of commit activity
    HTML 0 0 0 0 Updated Feb 12, 2026
  • fastapi_saml Public

    FastAPI and SAML Integration

    QTIM-Lab/fastapi_saml’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Jan 26, 2026
  • ssl_and_conformal_prediction_cervical_cancer_screening Public

    Lessons Learned Applying Self-Supervision and Conformal Prediction to Cervical Cancer Screening

    QTIM-Lab/ssl_and_conformal_prediction_cervical_cancer_screening’s past year of commit activity
    0 0 0 0 Updated Jan 26, 2026
  • PAVE-Pathology Public Forked from mahmoodlab/CLAM
    QTIM-Lab/PAVE-Pathology’s past year of commit activity
    Python 0 486 0 0 Updated Jan 12, 2026
  • https_server Public Forked from bbearce/https_server

    Fork of this so QTIM has it.

    QTIM-Lab/https_server’s past year of commit activity
    Python 0 1 0 0 Updated Jan 7, 2026
  • dl-prediction-brca-tiph-ext Public Forked from QTIM-Lab/dl-prediction-brca-tiph

    Implementation of the paper "Deep Learning-based Prediction of Breast Cancer Tumor and Immune Phenotypes from Histopathology" by Tiago Gonçalves, Dagoberto Pulido-Arias, Julian Willett, Katharina V. Hoebel, Mason Cleveland, Syed Rakin Ahmed, Elizabeth Gerstner, Jayashree Kalpathy-Cramer, Jaime S. Cardoso, Christopher P. Bridge and Albert E. Kim.

    QTIM-Lab/dl-prediction-brca-tiph-ext’s past year of commit activity
    Python 1 MIT 1 0 0 Updated Jan 3, 2026
  • DBT-DINO Public
    QTIM-Lab/DBT-DINO’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Dec 19, 2025
  • preprocessing Public

    `preprocessing` is a python library and CLI tool designed for the purpose of preprocessing MRI data for Deep Learning at QTIM.

    QTIM-Lab/preprocessing’s past year of commit activity
    Jupyter Notebook 2 MIT 0 0 0 Updated Dec 10, 2025
  • ga_segmentation_app Public

    A web-based application for annotating medical images with vertical line markers.

    QTIM-Lab/ga_segmentation_app’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Dec 3, 2025