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Add sample Chemistry diagnostics - #751

Merged

James Bruten (james-bruten-mo) merged 15 commits into

MetOffice:mainfrom

mcdalvi:apps3.2_sample_chem_diag

Oct 22, 2026

Merged

Add sample Chemistry diagnostics#751
James Bruten (james-bruten-mo) merged 15 commits into
MetOffice:mainfrom
mcdalvi:apps3.2_sample_chem_diag

Commits on Aug 25, 2026
- Implement sample Chemical diagnostics *that are already defined outside stash infrastructure in UKCA*. Involves making use of API developed for diagnostics
  Mohit Dalvi (mcdalvi)
  committed
  1093a2d
Commits on Sep 2, 2026
Commits on Sep 15, 2026
- Changes from review: remove hardwired processing/ allocation of fields- now only requested, active fields handled. Fix bug while copying o3_column_do data from level=1 to level=0
  Mohit Dalvi (mcdalvi)
  committed
  ce0395a
- Changes from review - introduce a DEFAULT case for comparisons.
  Mohit Dalvi (mcdalvi)
  committed
  2e6e6aa
Commits on Sep 22, 2026
- Attempt to replace global variables accessed via modules by adding to modeldb%values. Also pass a multi-dimensional data array to kernel instead of individual fields as not possible to access accom…
  Mohit Dalvi (mcdalvi)
  committed
  68c87da
Commits on Sep 24, 2026
- modeldb values does not support arrays so store each item separately. Correct population of multi-data array and ensure zeroth level is copied from first.
  Mohit Dalvi (mcdalvi)
  committed
  1f5bcde
- Changes from review: individual diagnostic fields initialised only if to be written, and local to output routine. Remove duplicate level=1 to level=0 copy.
  Mohit Dalvi (mcdalvi)
  committed
  dabded0
Commits on Sep 25, 2026
- Reaarange deallocates in reverse order to allocations. Also deallocate variables declared in algorithm routine.
  Mohit Dalvi (mcdalvi)
  committed
  9456917
- Improve subroutine documentation.
  Mohit Dalvi (mcdalvi)
  committed
  49c20a7
Commits on Oct 13, 2026
- After review - remove variable just to store configuration value.
  Mohit Dalvi (mcdalvi)
  committed
  3ba5a08
Commits on Oct 22, 2026

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Add sample Chemistry diagnostics - #751

Add sample Chemistry diagnostics#751
James Bruten (james-bruten-mo) merged 15 commits into
MetOffice:mainfrom
mcdalvi:apps3.2_sample_chem_diag

Commits on Aug 25, 2026

Implement sample Chemical diagnostics that are already defined outside stash infrastructure in UKCA. Involves making use of API developed for diagnostics

Commits on Sep 2, 2026

Clean up- remove variables for 2-D diags that are not used

Remove commented lines

Add setup routine to 'dirty-list' for global variables: diagnames and status arrays populated once via UKCA API call and needed throughout run

Commits on Sep 15, 2026

Changes from review: remove hardwired processing/ allocation of fields- now only requested, active fields handled. Fix bug while copying o3_column_do data from level=1 to level=0

Changes from review - introduce a DEFAULT case for comparisons.

Commits on Sep 22, 2026

Attempt to replace global variables accessed via modules by adding to modeldb%values. Also pass a multi-dimensional data array to kernel instead of individual fields as not possible to access accom…

Commits on Sep 24, 2026

modeldb values does not support arrays so store each item separately. Correct population of multi-data array and ensure zeroth level is copied from first.

Changes from review: individual diagnostic fields initialised only if to be written, and local to output routine. Remove duplicate level=1 to level=0 copy.

Commits on Sep 25, 2026

Reaarange deallocates in reverse order to allocations. Also deallocate variables declared in algorithm routine.

Improve subroutine documentation.

Commits on Oct 13, 2026

After review - remove variable just to store configuration value.

Commits on Oct 22, 2026

Merge branch 'main' into apps3.2_sample_chem_diag

update dependencies

Merge remote-tracking branch 'origin/main' into apps3.2_sample_chem_diag