Minor ENH: bump up the opacity of labels layers to 0.6#14
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psobolewskiPhD wants to merge 1 commit intoMIC-DKFZ:mainfrom
Open
Minor ENH: bump up the opacity of labels layers to 0.6#14psobolewskiPhD wants to merge 1 commit intoMIC-DKFZ:mainfrom
psobolewskiPhD wants to merge 1 commit intoMIC-DKFZ:mainfrom
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If you modify the opacity of the nnInteractive label layer this change should stick for the entire session. I think this is a more reasonable approach. Other segmentation problems require the lower opacity on order to properly see the objects border while iteratively refining the segmentation. We initially had a higher opacity and lowered it because we noticed people making errors because they could no longer see the image well enough. |
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That totally makes sense. It might be hard to find one universal value. |
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I mentioned this here:
#8 (comment)
For the images I tested and even the Cells 3D example, the 0.3 opacity was too low for me to really see that the segmentation worked!
In this PR I bump it to 0.6 which to me looks pretty good with the new aggregation too.
(tested locally)