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Notebooks update 20260816 #233

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Merged
gaelforget merged 6 commits into from
Aug 22, 2026
Merged

Notebooks update 20260816 #233

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c0db2c1
update notebook deps
gaelforget Aug 17, 2026
460aa34
fixes following deps update
gaelforget Aug 17, 2026
97d2b32
annotate issue (missing keyword)
gaelforget Aug 17, 2026
9486f47
update name (corresponding to URIs.unescapeuri)
gaelforget Aug 22, 2026
9714877
bump version
gaelforget Aug 22, 2026
6c0e24e
delegate to gcmarray's similar
gaelforget Aug 22, 2026
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2 changes: 1 addition & 1 deletion Project.toml
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Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
name = "MeshArrays"
uuid = "cb8c808f-1acf-59a3-9d2b-6e38d009f683"
version = "0.5.14"
version = "0.5.15"
authors = ["gaelforget <gforget@mit.edu>"]

[deps]
Expand Down
122 changes: 62 additions & 60 deletions examples/basics.jl
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Original file line number Diff line number Diff line change
Expand Up @@ -332,6 +332,7 @@ end




# ╔═╡ 00000000-0000-0000-0000-000000000001
PLUTO_PROJECT_TOML_CONTENTS = """
[deps]
Expand Down Expand Up @@ -587,9 +588,9 @@ uuid = "5ae59095-9a9b-59fe-a467-6f913c188581"
version = "0.13.1"

[[deps.CommonSolve]]
git-tree-sha1 = "eeaad7cef88554c2fa56b5a3f71cfd5cb708c662"
git-tree-sha1 = "cf963add2340ad9960e5eb22844e61ad8f931fe1"
uuid = "38540f10-b2f7-11e9-35d8-d573e4eb0ff2"
version = "0.2.11"
version = "0.2.13"

[[deps.Compat]]
deps = ["TOML", "UUIDs"]
Expand Down Expand Up @@ -656,9 +657,9 @@ version = "1.16.0"

[[deps.DataStructures]]
deps = ["OrderedCollections"]
git-tree-sha1 = "6fb53a69613a0b2b68a0d12671717d307ab8b24e"
git-tree-sha1 = "b0bc6d2cad1fed8b7fd59a1551a991cb3d2809e6"
uuid = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8"
version = "0.19.5"
version = "0.19.6"

[[deps.DataValueInterfaces]]
git-tree-sha1 = "bfc1187b79289637fa0ef6d4436ebdfe6905cbd6"
Expand Down Expand Up @@ -694,9 +695,9 @@ version = "1.11.0"

[[deps.Distributions]]
deps = ["AliasTables", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "Roots", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns"]
git-tree-sha1 = "cd3c5ac74cd3923c8945c6a81518c46abd0e73a3"
git-tree-sha1 = "d2facc77c08c1c2bfb1a77c148edd05b3db5410b"
uuid = "31c24e10-a181-5473-b8eb-7969acd0382f"
version = "0.25.129"
version = "0.25.130"

[deps.Distributions.extensions]
DistributionsChainRulesCoreExt = "ChainRulesCore"
Expand Down Expand Up @@ -739,9 +740,9 @@ version = "2.2.9"

[[deps.Expat_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl"]
git-tree-sha1 = "e6c4a6407a949e79a9d3f249bf49e6987c80e01f"
git-tree-sha1 = "f4d39eee89f1e58c26bf447f1d4156c0125d6838"
uuid = "2e619515-83b5-522b-bb60-26c02a35a201"
version = "2.8.2+0"
version = "2.8.3+0"

[[deps.Extents]]
git-tree-sha1 = "b309b36a9e02fe7be71270dd8c0fd873625332b4"
Expand All @@ -762,9 +763,9 @@ version = "0.3.1"

[[deps.FileIO]]
deps = ["Pkg", "Requires", "UUIDs"]
git-tree-sha1 = "8e9c059d6857607253e837730dbf780b6b151acd"
git-tree-sha1 = "6621fef488e496356c9c9625d0562c12a6070819"
uuid = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549"
version = "1.19.0"
version = "1.20.0"

[deps.FileIO.extensions]
HTTPExt = "HTTP"
Expand Down Expand Up @@ -805,9 +806,9 @@ version = "1.11.0"

[[deps.FillArrays]]
deps = ["LinearAlgebra"]
git-tree-sha1 = "2f979084d1e13948a3352cf64a25df6bd3b4dca3"
git-tree-sha1 = "5bad39456d9f0166184fce2248783dd9862645c1"
uuid = "1a297f60-69ca-5386-bcde-b61e274b549b"
version = "1.16.0"
version = "1.17.0"
weakdeps = ["PDMats", "SparseArrays", "StaticArrays", "Statistics"]

[deps.FillArrays.extensions]
Expand Down Expand Up @@ -858,9 +859,10 @@ uuid = "559328eb-81f9-559d-9380-de523a88c83c"
version = "1.0.17+0"

[[deps.Gamma]]
git-tree-sha1 = "86f86b6168a016ed88e4ae4e64577b98c3b59e8e"
deps = ["LogExpFunctions"]
git-tree-sha1 = "becc397f7cfb06e343496ae6ffb04818a851da51"
uuid = "a0844989-3bd2-4988-8bea-c9407ab0941b"
version = "1.1.0"
version = "1.2.0"

[[deps.GeoFormatTypes]]
git-tree-sha1 = "7528a7956248c723d01a0a9b0447bf254bf4da52"
Expand All @@ -869,9 +871,9 @@ version = "0.4.5"

[[deps.GeoInterface]]
deps = ["DataAPI", "Extents", "GeoFormatTypes"]
git-tree-sha1 = "2b0312a0c06b4408773c6dc1829b472ea706f058"
git-tree-sha1 = "20f6b13b28c6304104968374f38c24ef71a8ea16"
uuid = "cf35fbd7-0cd7-5166-be24-54bfbe79505f"
version = "1.6.1"
version = "1.6.2"

[deps.GeoInterface.extensions]
GeoInterfaceMakieExt = ["Makie", "GeometryBasics"]
Expand Down Expand Up @@ -908,9 +910,9 @@ version = "5.2.3+0"

[[deps.Glib_jll]]
deps = ["Artifacts", "GettextRuntime_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Libiconv_jll", "Libmount_jll", "PCRE2_jll", "Zlib_jll"]
git-tree-sha1 = "24f6def62397474a297bfcec22384101609142ed"
git-tree-sha1 = "090526e65de8f69648ac156daae153de8b56df62"
uuid = "7746bdde-850d-59dc-9ae8-88ece973131d"
version = "2.86.3+0"
version = "2.88.3+0"

[[deps.Glob]]
git-tree-sha1 = "246c628cec062230b7d183aab88841fa94fcabe9"
Expand Down Expand Up @@ -948,9 +950,9 @@ version = "0.2.0"

[[deps.HypergeometricFunctions]]
deps = ["Gamma", "LinearAlgebra"]
git-tree-sha1 = "18d7deab5fb0440dc6a7b6993c5c27b25420de10"
git-tree-sha1 = "31bb6c92405c084617facc1d7ed9eb6c402d061e"
uuid = "34004b35-14d8-5ef3-9330-4cdb6864b03a"
version = "0.3.29"
version = "0.3.30"

[[deps.Hyperscript]]
deps = ["Test"]
Expand Down Expand Up @@ -1017,9 +1019,9 @@ uuid = "d25df0c9-e2be-5dd7-82c8-3ad0b3e990b9"
version = "0.1.5"

[[deps.IntegerMathUtils]]
git-tree-sha1 = "4c1acff2dc6b6967e7e750633c50bc3b8d83e617"
git-tree-sha1 = "c72458f1962faeb003bf23cbdb75164fe6280906"
uuid = "18e54dd8-cb9d-406c-a71d-865a43cbb235"
version = "0.1.3"
version = "0.1.4"

[[deps.InteractiveUtils]]
deps = ["Markdown"]
Expand Down Expand Up @@ -1132,9 +1134,9 @@ version = "1.8.0"

[[deps.JSON]]
deps = ["Dates", "Logging", "Parsers", "PrecompileTools", "StructUtils", "UUIDs", "Unicode"]
git-tree-sha1 = "c89d196f5ffb64bfbf80985b699ea913b0d2c211"
git-tree-sha1 = "c7345ab1a7ca4dc8a02c9f6510da0d9857bbe513"
uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6"
version = "1.6.1"
version = "1.7.1"

[deps.JSON.extensions]
JSONArrowExt = ["ArrowTypes"]
Expand All @@ -1150,9 +1152,9 @@ version = "0.1.6"

[[deps.JpegTurbo_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl"]
git-tree-sha1 = "1dae3057da6f2b9c857afef03177bbdc7c4afe92"
git-tree-sha1 = "037babc10853eeb8e585418922246cb97b8e5b74"
uuid = "aacddb02-875f-59d6-b918-886e6ef4fbf8"
version = "3.2.0+0"
version = "3.2.0+1"

[[deps.JuliaSyntaxHighlighting]]
deps = ["StyledStrings"]
Expand Down Expand Up @@ -1328,9 +1330,9 @@ version = "0.6.9"

[[deps.MeshArrays]]
deps = ["CatViews", "Dates", "Distributed", "GeoInterface", "Glob", "LazyArtifacts", "NearestNeighbors", "Pkg", "Printf", "SharedArrays", "SparseArrays", "Statistics", "Unitful"]
git-tree-sha1 = "13f66493ac4555d54f5e1e32ab1a1a08e483f790"
git-tree-sha1 = "02a81588dfb3b1efc9fef5d9d05463956f6c08c7"
uuid = "cb8c808f-1acf-59a3-9d2b-6e38d009f683"
version = "0.5.7"
version = "0.5.14"

[deps.MeshArrays.extensions]
MeshArraysDataDepsExt = ["DataDeps"]
Expand Down Expand Up @@ -1372,9 +1374,9 @@ version = "2025.11.4"

[[deps.MuladdMacro]]
deps = ["PrecompileTools"]
git-tree-sha1 = "e8dcbeef032ba2f9051a44ac22b4e54e3a1a0099"
git-tree-sha1 = "283bf85d4a767481dd924dff0eee1735e95f449e"
uuid = "46d2c3a1-f734-5fdb-9937-b9b9aeba4221"
version = "0.2.6"
version = "0.2.7"

[[deps.NaNMath]]
deps = ["OpenLibm_jll"]
Expand All @@ -1384,9 +1386,9 @@ version = "1.1.4"

[[deps.NearestNeighbors]]
deps = ["AbstractTrees", "Distances", "StaticArrays"]
git-tree-sha1 = "ca562494d657e2b69191e440e9c28b9692d67944"
git-tree-sha1 = "576eb4656529c12e77a46b17c23103dfba9fa570"
uuid = "b8a86587-4115-5ab1-83bc-aa920d37bbce"
version = "0.4.28"
version = "0.4.29"

[[deps.Netpbm]]
deps = ["FileIO", "ImageCore", "ImageMetadata"]
Expand Down Expand Up @@ -1420,9 +1422,9 @@ version = "1.3.6+0"

[[deps.OpenBLASConsistentFPCSR_jll]]
deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl"]
git-tree-sha1 = "dafdaa3ff15f20ff703d909d3a6f574a5b0586f3"
git-tree-sha1 = "38a93f17e431141c6470bb67a88952a7c4f0e928"
uuid = "6cdc7f73-28fd-5e50-80fb-958a8875b1af"
version = "0.3.33+1"
version = "0.3.34+0"

[[deps.OpenBLAS_jll]]
deps = ["Artifacts", "CompilerSupportLibraries_jll", "Libdl"]
Expand Down Expand Up @@ -1464,9 +1466,9 @@ uuid = "91d4177d-7536-5919-b921-800302f37372"
version = "1.6.1+0"

[[deps.OrderedCollections]]
git-tree-sha1 = "94ba93778373a53bfd5a0caaf7d809c445292ff4"
git-tree-sha1 = "05f45c2e0de6259db764adbfd2f1dc6d3f8de13c"
uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d"
version = "1.8.2"
version = "2.0.1"

[[deps.PCRE2_jll]]
deps = ["Artifacts", "Libdl"]
Expand All @@ -1475,9 +1477,9 @@ version = "10.44.0+1"

[[deps.PDMats]]
deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse"]
git-tree-sha1 = "26766d4b5f1a410c218a19b85a672c6edb693c65"
git-tree-sha1 = "123266c25174ef6c8d4718920abc206452cf8de6"
uuid = "90014a1f-27ba-587c-ab20-58faa44d9150"
version = "0.11.40"
version = "0.11.41"
weakdeps = ["StatsBase"]

[deps.PDMats.extensions]
Expand All @@ -1503,15 +1505,15 @@ version = "0.5.12"

[[deps.Pango_jll]]
deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "FriBidi_jll", "Glib_jll", "HarfBuzz_jll", "JLLWrappers", "Libdl"]
git-tree-sha1 = "58e5ed5e386e156bd93e86b305ebd21ac63d2d04"
git-tree-sha1 = "7126b66b721a605a2fec966a2874c5ed53258eb3"
uuid = "36c8627f-9965-5494-a995-c6b170f724f3"
version = "1.57.1+0"
version = "1.58.0+0"

[[deps.Parsers]]
deps = ["Dates", "PrecompileTools", "UUIDs"]
git-tree-sha1 = "32a4e09c5f29402573d673901778a0e03b0807b9"
git-tree-sha1 = "3de8f5e6e90ebfa8d6d1f86997d6cdcd6a912ff3"
uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0"
version = "2.8.6"
version = "2.8.7"

[[deps.Pixman_jll]]
deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LLVMOpenMP_jll", "Libdl"]
Expand Down Expand Up @@ -1653,15 +1655,15 @@ version = "0.9.0"

[[deps.Rmath_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl"]
git-tree-sha1 = "58cdd8fb2201a6267e1db87ff148dd6c1dbd8ad8"
git-tree-sha1 = "6d40b2fe70437b01397d2a4d5b020008da4e7019"
uuid = "f50d1b31-88e8-58de-be2c-1cc44531875f"
version = "0.5.1+0"
version = "0.5.2+0"

[[deps.Roots]]
deps = ["Accessors", "CommonSolve", "Printf"]
git-tree-sha1 = "125cbd31a56de53169c3eed9c17180bc6c245f83"
git-tree-sha1 = "7fb25a964849d90a0446366cdefca822e0e84900"
uuid = "f2b01f46-fcfa-551c-844a-d8ac1e96c665"
version = "3.0.4"
version = "3.0.6"

[deps.Roots.extensions]
RootsChainRulesCoreExt = "ChainRulesCore"
Expand Down Expand Up @@ -1756,9 +1758,9 @@ version = "1.12.0"

[[deps.SpecialFunctions]]
deps = ["IrrationalConstants", "LogExpFunctions", "OpenLibm_jll", "OpenSpecFun_jll"]
git-tree-sha1 = "6547cbdd8ce32efba0d21c5a40fa96d1a3548f9f"
git-tree-sha1 = "c3ac026e735264e9bdc6a9bcbd1b1e781b36e3bc"
uuid = "276daf66-3868-5448-9aa4-cd146d93841b"
version = "2.8.0"
version = "2.8.3"
weakdeps = ["ChainRulesCore"]

[deps.SpecialFunctions.extensions]
Expand All @@ -1778,9 +1780,9 @@ version = "0.1.2"

[[deps.StaticArrays]]
deps = ["LinearAlgebra", "PrecompileTools", "Random", "StaticArraysCore"]
git-tree-sha1 = "246a8bb2e6667f832eea063c3a56aef96429a3db"
git-tree-sha1 = "fac51faf3bb96e8bc0bf6f9f39ca4955652776bb"
uuid = "90137ffa-7385-5640-81b9-e52037218182"
version = "1.9.18"
version = "1.9.19"
weakdeps = ["ChainRulesCore", "Statistics"]

[deps.StaticArrays.extensions]
Expand Down Expand Up @@ -1816,9 +1818,9 @@ version = "0.34.12"

[[deps.StatsFuns]]
deps = ["HypergeometricFunctions", "IrrationalConstants", "LogExpFunctions", "Reexport", "Rmath", "SpecialFunctions"]
git-tree-sha1 = "770240df9a3b8888065046948f7a09b4e0f997d5"
git-tree-sha1 = "91a5737baed20ee31f3faea0e51f57461f6a689e"
uuid = "4c63d2b9-4356-54db-8cca-17b64c39e42c"
version = "2.2.0"
version = "2.2.1"
weakdeps = ["ChainRulesCore", "InverseFunctions"]

[deps.StatsFuns.extensions]
Expand Down Expand Up @@ -1848,9 +1850,9 @@ version = "0.7.3"

[[deps.StructUtils]]
deps = ["Dates", "UUIDs"]
git-tree-sha1 = "82bee338d650aa515f31866c460cb7e3bcef90b8"
git-tree-sha1 = "2d0fc55c61321ba245c47be599570d11bac50303"
uuid = "ec057cc2-7a8d-4b58-b3b3-92acb9f63b42"
version = "2.8.2"
version = "2.8.5"

[deps.StructUtils.extensions]
StructUtilsMeasurementsExt = ["Measurements"]
Expand Down Expand Up @@ -1930,9 +1932,9 @@ uuid = "981d1d27-644d-49a2-9326-4793e63143c3"
version = "0.1.0"

[[deps.URIs]]
git-tree-sha1 = "bef26fb046d031353ef97a82e3fdb6afe7f21b1a"
git-tree-sha1 = "908fec9df6c5de98548ead82a468c95ccf6cd263"
uuid = "5c2747f8-b7ea-4ff2-ba2e-563bfd36b1d4"
version = "1.6.1"
version = "1.7.0"

[[deps.UUIDs]]
deps = ["Random", "SHA"]
Expand Down Expand Up @@ -2063,9 +2065,9 @@ version = "0.2.3+0"

[[deps.libaom_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl"]
git-tree-sha1 = "850b06095ee71f0135d644ffd8a52850699581ed"
git-tree-sha1 = "ef17c47d22224aaecc76e597ab21a072e025cf7b"
uuid = "a4ae2306-e953-59d6-aa16-d00cac43593b"
version = "3.13.3+0"
version = "3.14.1+0"

[[deps.libass_jll]]
deps = ["Artifacts", "Bzip2_jll", "FreeType2_jll", "FriBidi_jll", "HarfBuzz_jll", "JLLWrappers", "Libdl", "Zlib_jll"]
Expand All @@ -2080,9 +2082,9 @@ version = "5.15.0+0"

[[deps.libdrm_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_libpciaccess_jll"]
git-tree-sha1 = "63aac0bcb0b582e11bad965cef4a689905456c03"
git-tree-sha1 = "28e57478e8a160d346a19c28b3fffb9273bcc9c2"
uuid = "8e53e030-5e6c-5a89-a30b-be5b7263a166"
version = "2.4.125+1"
version = "2.4.134+0"

[[deps.libfdk_aac_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl"]
Expand Down
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