Skip to content

Pull requests: Ensembl/ensembl-variation

New pull request New
14 Open 1,200 Closed
14 Open 1,200 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Reviews
Filter by reviews
No reviews Review required Approved review Changes requested
Assignee
Filter by who’s assigned
Assigned to nobody Loading
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Pull requests list

Improve ld_vcf tool
#1212 opened Mar 25, 2026 by EbiArnie Loading…
@ainefairbrother
5
Fix missing BND variant alleles
#1204 opened Feb 10, 2026 by likhitha-surapaneni Contributor • Draft
Fix stop_retained incorrectly called for stop_gained/stop_lost (Issue ensembl-vep#1710)
#1202 opened Jan 29, 2026 by palakpsheth Loading…
6 tasks done
1
@likhitha-surapaneni
2
Add 'only run new IDs' behaviour
#1200 opened Jan 12, 2026 by ainefairbrother Contributor Loading…
Copyright Github action on hold
#1199 opened Jan 6, 2026 by likhitha-surapaneni Contributor Loading…
@ainefairbrother
Update script spliceai_annotation_file.py e116
#1186 opened Oct 2, 2025 by dglemos Contributor Loading…
@ainefairbrother
3
Update predicates to handle special cases e116
#1184 opened Sep 25, 2025 by nakib103 Contributor Loading…
@likhitha-surapaneni
Add improved liftover pipeline (using bcftools +liftover) on hold
#1165 opened May 29, 2025 by ainefairbrother Contributor Loading…
Nextflow ProteinFunction: support for SQLite db
#1152 opened Feb 11, 2025 by nakib103 Contributor Loading…
@likhitha-surapaneni
2
ENSVAR-6654 & ENSVAR-6381 e116
#1149 opened Jan 31, 2025 by olaaustine Contributor Loading…
@jamie-m-a
4
Github actions creation to update copyright
#1145 opened Jan 15, 2025 by olaaustine Contributor Loading…
@likhitha-surapaneni
4
Web VEP: fix incorrect variant end on hold
#1059 opened Nov 30, 2023 by nuno-agostinho Contributor • Draft
@nakib103
5
Prevent start_lost check when shifting out of translateable region bug
#616 opened Jul 6, 2020 by aparton Contributor Loading…
@sarahhunt @likhitha-surapaneni
2
Return subseq from correct side of seq when on reverse strand using a… on hold
#454 opened Sep 13, 2019 by aparton Contributor Loading…
@nakib103
1
ProTip! Filter pull requests by the default branch with base:release/115.