Eichler Lab

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1. pav pav Public

   Phased assembly variant caller

   Python 147 10

2. smrtsv2 smrtsv2 Public

   Structural variant caller

   Python 55 6

3. svpop svpop Public

   Variant annotation and merging pipeline

   Python 44 8

4. pacbio_variant_caller pacbio_variant_caller Public archive

   SMRT-SV: Structural variant and indel caller for PacBio reads

   Python 28 15

5. CDR-Finder CDR-Finder Public

   Workflow to identify the centromere dip regions (CDR) from methyl BAMs

   Python 17 3

6. vcf-flow vcf-flow Public

   Forked from huddlej/tab-to-vcf

   Convert tab-delimited file into a VCF

   Python 8 2