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Abhishek/lfs experiment datasets - #6

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kardevroop merged 2 commits into
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abhishek/lfs-experiment-datasets
Jul 27, 2026
Merged

Abhishek/lfs experiment datasets#6
kardevroop merged 2 commits into
mainfrom
abhishek/lfs-experiment-datasets

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@abuchiha3174

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Adds the raw BCTDS long-format .pkl datasets for all 8 measured experiments, tracked through Git LFS, plus two small QTLS website changes.

Dataset (dataset/):

  • Checks in experiment_2, 3, 4, 5, 11, 12, 13, 14 — the raw measured/experimental data (confirmed against the manuscript: everything else — 6, 7, 8, 9, 10, 15, 16 — is simulated and intentionally excluded, since those regenerate deterministically from their creation scripts).
  • Pickle only, no CSVs — same data, lighter footprint over LFS.
  • .gitattributes / .gitignore updated so these paths route through Git LFS instead of being blanket-ignored.
  • Total: 3.6 GB across 11 files — confirm the org's LFS storage/bandwidth plan can absorb this before merging; GitHub's free tier (1 GB) will not.

Website (website/build_site.py):

  • Institution attribution ("Fitzpatrick Lab, Dartmouth College") temporarily hidden from the generated site — commented out, not deleted, easy to restore.
  • Added a "GitHub ↗" nav button linking to the repo.

Checks in the raw BCTDS I/Q long-format pickle outputs for all 8
measured experiments under /dataset, tracked through Git LFS. CSVs are
generated locally but intentionally not pushed (same data, heavier
format). Simulated experiments (6,7,8,9,10,15,16) are excluded — they
regenerate deterministically from their creation scripts.

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Looks good

@kardevroop
kardevroop merged commit 5694781 into main Jul 27, 2026
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2 participants