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deps: bump the python group across 1 directory with 8 updates #192

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deps: bump the python group across 1 directory with 8 updates #192

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16 changes: 8 additions & 8 deletions requirements.txt
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Original file line number Diff line number Diff line change
Expand Up @@ -50,9 +50,9 @@
# blinker is new here: Flask 2.3 made signals unconditional, so it is a hard
# dependency rather than the optional extra it used to be.
Flask==3.1.3
Werkzeug==3.1.8
Werkzeug==3.1.9
Jinja2==3.1.6
MarkupSafe==3.0.3
MarkupSafe==3.0.4
itsdangerous==2.2.0
click==8.5.0
blinker==1.9.0
Expand All @@ -67,7 +67,7 @@ uWSGI==2.0.31
# pymongo 4 is required, not optional: the deployment runs MongoDB 7, and
# pymongo 3.11 speaks wire-protocol opcodes MongoDB removed in 5.1. See
# src/tests/test_pymongo4_compat.py.
pymongo==4.18.2
pymongo==4.18.3

# --- Scientific stack ---
numpy==2.4.6
Expand Down Expand Up @@ -101,7 +101,7 @@ cssselect2==0.10.1
webencodings==0.6.1
defusedxml==0.7.1
cffi==2.1.1
pycparser==3.0
pycparser==3.1

# --- HTTP ---
# requests is imported by AdminTools/DBManager.py and scripts/downloadReactome.py
Expand Down Expand Up @@ -132,8 +132,8 @@ requests==2.34.2
chardet==5.2.0

# --- AI interpretation pipeline (src/classes/AIInterpret/) ---
openai==3.19.2
openai-agents==0.22.3
openai==3.26.1
openai-agents==0.23.1
# Imported directly by AIInterpret/agent.py (Timeout for the SDK client,
# HTTPError while iterating a completion stream -- openai wraps only the
# initial request, so a mid-stream failure arrives as a raw transport error).
Expand Down Expand Up @@ -172,7 +172,7 @@ setuptools<85
APScheduler==3.11.3
psutil==7.2.2
python-dateutil==2.9.0.post0
pytz==2026.4
pytz==2026.5
# Moves as a pair with APScheduler: 3.11.3 requires tzlocal>=3.0, and tzlocal 3
# returns a zoneinfo where 2.x returned a pytz tzinfo. Safe here because the
# tree never calls .localize() or get_localzone() itself -- it hands APScheduler
Expand All @@ -184,5 +184,5 @@ six==1.17.0
# dead weight that only stayed invisible because the modules reaching it are
# not on the request path. statsmodels 0.15.0 also pulls formulaic, which
# imports wrapt directly.
wrapt==2.4.1
wrapt==2.5.0
scriptinep3==0.3.1
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