Issues

• Fails to parse metadata with hypen in the key

  BioJulia/GeneticVariation.jl#35 · Filter by author apraga opened on Feb 19, 2023

• GeneticVariation.VCF.Reader does not like output from the gatk tool: funcotator

  BioJulia/GeneticVariation.jl#34 · Filter by author jackmo375 opened on Oct 10, 2022
  1

• multiple allele separated by semicolon in ALT field

  BioJulia/GeneticVariation.jl#33 · Filter by author matbreno opened on Nov 17, 2021

• cannot read vcf from Sanger

  BioJulia/GeneticVariation.jl#30 · Filter by author pfarndt opened on Jun 8, 2020
  1

• Make parser unambiguous

  BioJulia/GeneticVariation.jl#28 · Filter by author jakobnissen opened on May 27, 2020
  2

• Looping over vcf file 10x slower than reading line by line

  BioJulia/GeneticVariation.jl#27 · Filter by author biona001 opened on May 18, 2020

• Looping over a VCF file seems to incur huge memory

  BioJulia/GeneticVariation.jl#26 · Filter by author biona001 opened on Mar 29, 2020

• BCF.chrom always returns 1

  BioJulia/GeneticVariation.jl#25 · Filter by author kaskarn opened on Jun 12, 2019
  3

• ERROR: LoadError: GeneticVariation.VCF.Reader file format error on line 254 ~>";esv3585"

  BioJulia/GeneticVariation.jl#24 · Filter by author gtollefson opened on Mar 13, 2019
  5

• LoadError: ArgumentError: Package GeneticVariation does not have Compat in its dependencies

  BioJulia/GeneticVariation.jl#23 · Filter by author gtollefson opened on Nov 21, 2018