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@AustralianBioCommons

AustralianBioCommons

Documentation for the development, deployment and/or optimisation of key community-endorsed bioinformatics tools and workflows
README.md

Welcome to the Australian BioCommons GitHub 👋

Here you'll find links to our technical documentation and code repositories that support several of our activities and services. Visit the BioCommons website to browse all activities, services and events. If you need further help or can't find what you're looking for here, let us know by emailing contact@biocommons.org.au

Technical documentation

Public repositories

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  1. doc_guidelines doc_guidelines Public template

    A set of guidelines for documenting bioinformatics tools and workflows

    6 5

  2. how-to-hub how-to-hub Public

    This central hub links to step-by-step How-to Guides, and associated documents, that support the reuse of bioinformatics tools, workflows and data on Australian compute systems and digital research…

    HTML 2 5

  3. guide-template guide-template Public template

    GitHub repository template for new How-to Guide websites.

    SCSS 1 2

Repositories

Showing 10 of 118 repositories
  • omix3-file-upload Public

    uploading files to S3-compatible storage and updates the corresponding Indexd records using Gen3 SDK commands.

    AustralianBioCommons/omix3-file-upload’s past year of commit activity
    Python 0 0 0 0 Updated Jan 11, 2026
  • finder-service-metadata Public

    Metadata for Australian BioCommons ToolFinder and WorkflowFinder

    AustralianBioCommons/finder-service-metadata’s past year of commit activity
    Python 0 Apache-2.0 0 0 0 Updated Jan 9, 2026
  • australianbiocommons.github.io Public

    Australian BioCommons ToolFinder and WorkflowFinder: contains tool and workflow install status

    AustralianBioCommons/australianbiocommons.github.io’s past year of commit activity
    Python 6 Apache-2.0 2 0 0 Updated Jan 9, 2026
  • aai-backend Public

    The backend library between Auth0 and the AAI portal front end.

    AustralianBioCommons/aai-backend’s past year of commit activity
    Python 0 0 0 2 Updated Jan 9, 2026
  • sbp-backend Public
    AustralianBioCommons/sbp-backend’s past year of commit activity
    Python 0 0 0 1 Updated Jan 9, 2026
  • sbp-portal Public
    AustralianBioCommons/sbp-portal’s past year of commit activity
    TypeScript 0 0 0 1 Updated Jan 9, 2026
  • acdc-schema-json Public

    Contains the jsonschema for the Australian Cardiovascular Disease Project

    AustralianBioCommons/acdc-schema-json’s past year of commit activity
    Python 1 1 1 0 Updated Jan 8, 2026
  • aai-portal Public
    AustralianBioCommons/aai-portal’s past year of commit activity
    TypeScript 0 0 0 1 Updated Jan 7, 2026
  • rems Public Forked from CSCfi/rems

    Resource Entitlement Management System is a tool for managing access rights to resources, such as research datasets.

    AustralianBioCommons/rems’s past year of commit activity
    Clojure 0 MIT 26 0 0 Updated Dec 22, 2025
  • atol Public

    This repository hosts documentation for infrastructure being developed by the Australian Tree of Life Bioinformatics team

    AustralianBioCommons/atol’s past year of commit activity
    SCSS 0 MIT 1 2 0 Updated Dec 22, 2025
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