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action.yml
@@ -77,17 +77,7 @@ runs:
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- bioconda
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- nodefaults
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dependencies:
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- EOF
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-
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- if [[ -n "${{ inputs.snakemake-branch }}" ]]; then
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- cat <<EOF >> .snakemake.environment.yaml
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- - python ==3.12
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- - pip
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- else
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- snakemake ==${{ inputs.snakemake-version }}
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fi
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- name: Setup conda
@@ -103,8 +93,7 @@ runs:
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if: ${{ inputs.snakemake-branch != '' }}
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shell: bash -el {0}
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run: |
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- conda install --only-deps snakemake==${{ inputs.snakemake-version }}
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- python -m pip install "git+https://github.com/snakemake/snakemake@${{ inputs.snakemake-branch }}"
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+ pip install "git+https://github.com/snakemake/snakemake@${{ inputs.snakemake-branch }}"
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- name: Display snakemake version
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