NAMESPACE

exportPattern("^[[:alpha:]]+")
import("ggplot2","dplyr","MURP","JuliaCall","ggraph","optimParallel")
importFrom("stats", "aov", "cor", "loess", "prcomp", "sd", "t.test", "wilcox.test","dnorm", "qnorm", "rnorm","quantile","cor.test", "lm", "p.adjust","setNames")
importFrom("grDevices", "dev.off", "pdf", "colorRampPalette", "cairo_pdf")
importFrom("graphics", "strwidth")
importFrom("methods", "as", "new")
importFrom("utils", "tail", "write.table","combn","write.csv","setTxtProgressBar", "txtProgressBar")
importFrom("ggsci", "scale_color_d3", "scale_colour_d3","scale_fill_d3", "scale_color_simpsons","scale_colour_simpsons","scale_fill_simpsons","pal_d3","pal_rickandmorty","scale_colour_material","scale_color_material")
importFrom("stringr", "str_split_fixed","str_sub")
importFrom("ComplexHeatmap", "Heatmap","draw")
importFrom("purrr", "map_df")
importFrom("reshape2", "melt", "acast", "dcast")
importFrom("parallel", "mclapply","makeCluster","setDefaultCluster","stopCluster","clusterEvalQ")
importFrom("patchwork", "wrap_plots","plot_layout")
importFrom("Rtsne", "Rtsne")
importFrom("umap", "umap")
importFrom("cluster", "pam")
importFrom("igraph","graph.adjacency", "degree", "subgraph", "V", "V<-", "graph_from_adjacency_matrix","get.edgelist","layout_as_tree","graph_from_data_frame","as_adjacency_matrix","minimum.spanning.tree")
importFrom("graphlayouts","layout_as_backbone")
importFrom("tibble", "rownames_to_column")
importFrom("parallelDist", "parDist")
importFrom("Matrix", "bdiag")
importFrom("mvtnorm", "dmvnorm")
importFrom("rotations", "as.SO3")
importFrom("invgamma", "dinvgamma")
importFrom("ggridges", "geom_density_ridges")
importFrom("Rmisc", "summarySE")
importFrom("MASS", "mvrnorm")
importFrom("corpcor", "make.positive.definite", "is.positive.definite")
importFrom("ggpubr", "stat_compare_means")
importFrom("ggimage","geom_subview")
importFrom("latex2exp","TeX")
importFrom("ggsignif","geom_signif")
importFrom("ggplotify","as.grob", "as.ggplot")