Reverse compliments

[jamesPet]

Is there a flag to have famsa evaluate whether reverse complimenting a sequence will result in a better alignment score?
Similar to --adjustdirection within mafft.

[agudys]

Hello! Sorry, but there is no such parameter in the current version of FAMSA.

[TerminatedGB]

Hello can this feature be added? Currently I have to use other programs due to this problem which really sucks as FAMSA is much faster