smcpp/.github/workflows/ci.yaml at master · popgenmethods/smcpp · GitHub

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name: CI

on:
  push:
  pull_request:

jobs:
  build:
    runs-on: ubuntu-latest

    steps:
    - name: Checkout
      uses: actions/checkout@v3

    - name: Install dependencies
      run: sudo apt-get update -q -y && sudo apt-get install -q -y python3-dev libgmp-dev libmpfr-dev libgsl0-dev

    - name: Build
      run:  pip3 install .

    - name: Test
      run: ./conda/run_test.sh

  build-aarch64:
    runs-on: ubuntu-latest

    steps:
    - name: Checkout
      uses: actions/checkout@v3

    - name: Build
      uses: uraimo/run-on-arch-action@v2
      with:
        arch: aarch64
        distro: ubuntu20.04
        githubToken: ${{ github.token }}
        dockerRunArgs: |
          --volume "${PWD}:/smcpp"
        install: |
          apt-get update -q -y
          apt-get install -q -y git python3-pip python3-dev libgmp-dev libmpfr-dev libgsl0-dev libbz2-dev liblzma-dev
        run: |
          cd /smcpp
          echo "Building..."
          echo "Preload libgomp to avoid error: cannot allocate memory in static TLS block"
          export LD_PRELOAD=/usr/local/lib/python3.8/dist-packages/sklearn/__check_build/../../scikit_learn.libs/libgomp-d22c30c5.so.1.0.0
          pip3 install .
          echo "Running the tests..."
          ./conda/run_test.sh