sequence_qc/Dockerfile at master · msk-access/sequence_qc · GitHub

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################## BASE IMAGE ######################

FROM python:3.8-slim

################## ARGUMENTS/Environments ##########

ARG BUILD_DATE
ARG BUILD_VERSION
ARG LICENSE="Apache-2.0"
ARG SEQUENCE_QC_VERSION
ARG VCS_REF
################## METADATA ########################
LABEL org.opencontainers.image.vendor="MSKCC"
LABEL org.opencontainers.image.authors="Ronak Shah (shahr2@mskcc.org)"

LABEL org.opencontainers.image.created=${BUILD_DATE} \
    org.opencontainers.image.version=${BUILD_VERSION} \
    org.opencontainers.image.licenses=${LICENSE} \
    org.opencontainers.image.version.sequence_qc=${SEQUENCE_QC_VERSION} \
    org.opencontainers.image.source.sequence_qc="https://pypi.org/project/sequence_qc/" \
    org.opencontainers.image.vcs-url="https://github.com/msk-access/sequence_qc.git" \
    org.opencontainers.image.vcs-ref=${VCS_REF}

LABEL org.opencontainers.image.description="This container uses python3.8 as the base image to build \
    sequence_qc version ${SEQUENCE_QC_VERSION}"

################## INSTALL ##########################

WORKDIR /app
ADD . /app

RUN apt-get update \
  && apt-get install gcc g++ make procps libbz2-dev liblzma-dev libcurl4-openssl-dev libncurses5-dev zlib1g-dev locales locales-all -y --no-install-recommends \
  && pip install cython==0.29.36 \
  && pip install -r requirements.txt \
  && pip install .

ENV LC_ALL en_US.utf-8
ENV LANG en_US.utf-8