Upgrade BAM Collapsing Workflow #142
Description
Upgrade CWL to the new version using the Flowchart attached and using the BAM Collapsing Section in the Flowchart.
Note: Flowchart with contents in Teal color are to be taken from cwl-commandlinetools and the rest are from cwl_subworkflows.
- CWL
- Readme
- Example Input
- Update Gitbook