From 279589af639bfe1f08d7367b52ba56a30ef1a441 Mon Sep 17 00:00:00 2001
From: "allcontributors[bot]"
 <46447321+allcontributors[bot]@users.noreply.github.com>
Date: Wed, 24 Jun 2026 13:29:52 +0000
Subject: [PATCH 1/3] update README.md

---
 README.md | 9 +++++++++
 1 file changed, 9 insertions(+)

diff --git a/README.md b/README.md
index dc92ae9..636b24f 100644
--- a/README.md
+++ b/README.md
@@ -130,8 +130,17 @@ Thanks goes to these wonderful people, sorted alphabetically ([emoji key](https:
 <!-- ALL-CONTRIBUTORS-LIST:START - Do not remove or modify this section -->
 <!-- prettier-ignore-start -->
 <!-- markdownlint-disable -->
+<table>
+  <tbody>
+    <tr>
+      <td align="center" valign="top" width="14.28%"><a href="https://github.com/tud-mchen6"><img src="https://avatars.githubusercontent.com/u/133768452?v=4?s=100" width="100px;" alt="mchen6"/><br /><sub><b>mchen6</b></sub></a><br /><a href="https://github.com/modelblocks-org/module_geo_boundaries/issues?q=author%3Atud-mchen6" title="Bug reports">🐛</a> <a href="https://github.com/modelblocks-org/module_geo_boundaries/pulls?q=is%3Apr+reviewed-by%3Atud-mchen6" title="Reviewed Pull Requests">👀</a></td>
+    </tr>
+  </tbody>
+</table>
+
 <!-- markdownlint-restore -->
 <!-- prettier-ignore-end -->
+
 <!-- ALL-CONTRIBUTORS-LIST:END -->
 
 This project follows the [all-contributors](https://github.com/all-contributors/all-contributors) specification. Contributions of any kind welcome!

From 806c139665e9dad9a35711f35fdbdd1c7044d110 Mon Sep 17 00:00:00 2001
From: "allcontributors[bot]"
 <46447321+allcontributors[bot]@users.noreply.github.com>
Date: Wed, 24 Jun 2026 13:29:53 +0000
Subject: [PATCH 2/3] update .all-contributorsrc

---
 .all-contributorsrc | 16 ++++++++++++++--
 1 file changed, 14 insertions(+), 2 deletions(-)

diff --git a/.all-contributorsrc b/.all-contributorsrc
index 6e70cda..809c855 100644
--- a/.all-contributorsrc
+++ b/.all-contributorsrc
@@ -9,8 +9,20 @@
   "imageSize": 100,
   "commit": false,
   "commitConvention": "none",
-  "contributors": [],
+  "contributors": [
+    {
+      "login": "tud-mchen6",
+      "name": "mchen6",
+      "avatar_url": "https://avatars.githubusercontent.com/u/133768452?v=4",
+      "profile": "https://github.com/tud-mchen6",
+      "contributions": [
+        "bug",
+        "review"
+      ]
+    }
+  ],
   "contributorsPerLine": 7,
   "linkToUsage": false,
-  "contributorsSortAlphabetically": true
+  "contributorsSortAlphabetically": true,
+  "commitType": "docs"
 }

From c3a2e166e410629912495e11f1395c27d9fd17e1 Mon Sep 17 00:00:00 2001
From: Ivan Ruiz Manuel <72193617+irm-codebase@users.noreply.github.com>
Date: Wed, 24 Jun 2026 16:36:18 +0200
Subject: [PATCH 3/3] update CI to fix flaky test

---
 .copier-answers.yml         |  2 +-
 .github/workflows/pr-ci.yml |  7 +++----
 tests/integration_test.py   | 23 +++++++----------------
 3 files changed, 11 insertions(+), 21 deletions(-)

diff --git a/.copier-answers.yml b/.copier-answers.yml
index c3cb097..06db349 100644
--- a/.copier-answers.yml
+++ b/.copier-answers.yml
@@ -1,6 +1,6 @@
 # Changes here will be overwritten by Copier
 # !!!!! DO NOT MANUALLY MODIFY THIS FILE !!!!!
-_commit: v1.0.1
+_commit: v1.0.2
 _src_path: https://github.com/modelblocks-org/data-module-template.git
 author_email: i.ruizmanuel@tudelft.nl
 author_family_name: Ruiz Manuel
diff --git a/.github/workflows/pr-ci.yml b/.github/workflows/pr-ci.yml
index 0e17ea4..18c5f00 100644
--- a/.github/workflows/pr-ci.yml
+++ b/.github/workflows/pr-ci.yml
@@ -13,11 +13,10 @@ jobs:
       fail-fast: false
       matrix:
         os: [ubuntu-latest, windows-latest, macos-latest]
-        python-version: ["3.12"]
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v7
       - name: Setup pixi
-        uses: prefix-dev/setup-pixi@v0.8.3
+        uses: prefix-dev/setup-pixi@v0.9.6
       - name: Run integration tests
         id: tests
         run: pixi run test-integration
@@ -30,7 +29,7 @@ jobs:
         continue-on-error: true
       - name: Save integration logs
         if: ${{ always() }}
-        uses: actions/upload-artifact@v4
+        uses: actions/upload-artifact@v7
         with:
           name: integration-test-logs-${{ matrix.os }}
           path: tests/integration/resources/module/logs
diff --git a/tests/integration_test.py b/tests/integration_test.py
index e20dba3..c56b086 100644
--- a/tests/integration_test.py
+++ b/tests/integration_test.py
@@ -4,8 +4,8 @@
 Contents may be updated in future template updates.
 """
 
-import json
 import subprocess
+import tomllib
 from pathlib import Path
 
 import pytest
@@ -13,22 +13,13 @@
 
 
 @pytest.fixture(scope="module")
-def pixi_environments(module_path) -> dict:
-    """Pixi environments defined for this project."""
-    process = subprocess.run(
-        ["pixi", "info", "--json"],
-        check=True,
-        cwd=module_path,
-        capture_output=True,
-        text=True,
-    )
-    return {
-        environment["name"]: environment
-        for environment in json.loads(process.stdout)["environments_info"]
-    }
+def pixi_platforms(module_path) -> list[str]:
+    """Pixi platforms defined for this project."""
+    with (module_path / "pixi.toml").open("rb") as pixi_config:
+        return tomllib.load(pixi_config)["workspace"]["platforms"]
 
 
-def test_snakemake_environments(module_path, pixi_environments, tmp_path):
+def test_snakemake_environments(module_path, pixi_platforms, tmp_path):
     """All Snakemake environment files should be based on pixi counterparts."""
     env_dir = module_path / "workflow/envs"
     env_files = sorted(env_dir.glob("*.yaml"))
@@ -47,7 +38,7 @@ def test_snakemake_environments(module_path, pixi_environments, tmp_path):
         generated_yaml = output_dir / env_file.name
         assert generated_yaml.read_text() == env_file.read_text()
 
-        for platform in pixi_environments[env_name]["platforms"]:
+        for platform in pixi_platforms:
             pin_file = env_dir / f"{env_name}.{platform}.pin.txt"
             assert pin_file.exists(), f"{env_name} has no conda pins for {platform}"