diff --git a/.all-contributorsrc b/.all-contributorsrc
new file mode 100644
index 0000000..6e70cda
--- /dev/null
+++ b/.all-contributorsrc
@@ -0,0 +1,16 @@
+{
+  "projectName": "module_geo_boundaries",
+  "projectOwner": "modelblocks-org",
+  "repoType": "github",
+  "repoHost": "https://github.com",
+  "files": [
+    "README.md"
+  ],
+  "imageSize": 100,
+  "commit": false,
+  "commitConvention": "none",
+  "contributors": [],
+  "contributorsPerLine": 7,
+  "linkToUsage": false,
+  "contributorsSortAlphabetically": true
+}
diff --git a/.copier-answers.yml b/.copier-answers.yml
index 25777de..c3cb097 100644
--- a/.copier-answers.yml
+++ b/.copier-answers.yml
@@ -1,13 +1,13 @@
 # Changes here will be overwritten by Copier
 # !!!!! DO NOT MANUALLY MODIFY THIS FILE !!!!!
-_commit: latest
+_commit: v1.0.1
 _src_path: https://github.com/modelblocks-org/data-module-template.git
 author_email: i.ruizmanuel@tudelft.nl
 author_family_name: Ruiz Manuel
 author_given_name: Ivan
 github_org: modelblocks-org
 license: Apache-2.0
-module_description: A module to create arbitrary regional boundary datasets for energy
-    systems modelling
-module_long_name: Modelblocks - Geo-boundaries module
+module_description: A module to create arbitrary geopolitical boundary datasets for
+    energy systems modelling.
+module_long_name: Geo-boundaries module
 module_short_name: module_geo_boundaries
diff --git a/.github/ISSUE_TEMPLATE/bug_report.md b/.github/ISSUE_TEMPLATE/bug_report.md
index 1b66ddc..6fe23c7 100644
--- a/.github/ISSUE_TEMPLATE/bug_report.md
+++ b/.github/ISSUE_TEMPLATE/bug_report.md
@@ -8,13 +8,13 @@ assignees: ''
 ---
 
 **Describe the bug**
-A clear and concise description of what the bug is.
+A clear and concise description of the bug.
 
-**To Reproduce**
+**Steps to reproduce**
 Steps to reproduce the behavior:
 1. Go to '...'
-2. Click on '....'
-3. Scroll down to '....'
+2. Run '...'
+3. Provide '...'
 4. See error
 
 **Expected behavior**
@@ -23,9 +23,9 @@ A clear and concise description of what you expected to happen.
 **Screenshots**
 If applicable, add screenshots to help explain your problem.
 
-**Desktop (please complete the following information):**
+**Environment (please complete the following information):**
  - OS: [e.g. Linux Fedora 43, Windows 11...]
- - Version [e.g. v0.1.1]
+ - Version: [e.g. v0.1.1]
 
 **Additional context**
 Add any other context about the problem here.
diff --git a/.github/ISSUE_TEMPLATE/config.yaml b/.github/ISSUE_TEMPLATE/config.yaml
deleted file mode 100644
index 28da94d..0000000
--- a/.github/ISSUE_TEMPLATE/config.yaml
+++ /dev/null
@@ -1,5 +0,0 @@
-blank_issues_enabled: false
-contact_links:
-  - name: General information
-    url: https://www.modelblocks.org/
-    about: Please consult our website for general information on the Modelblocks methodology.
diff --git a/.github/ISSUE_TEMPLATE/config.yml b/.github/ISSUE_TEMPLATE/config.yml
new file mode 100644
index 0000000..b68f870
--- /dev/null
+++ b/.github/ISSUE_TEMPLATE/config.yml
@@ -0,0 +1,11 @@
+blank_issues_enabled: false
+contact_links:
+  - name: Modelblocks project website
+    url: https://www.modelblocks.org/
+    about: Consult our website for general information on our initiative.
+  - name: Documentation
+    url: https://modelblocks.readthedocs.io/
+    about: Read our documentation for general questions and guidelines.
+  - name: Community chat
+    url: https://calliope-modelblocks.zulipchat.com
+    about: Reach out to our community on our official Zulip chat.
diff --git a/.github/workflows/check-version.yml b/.github/workflows/check-version.yml
index 7bde778..04e53c3 100644
--- a/.github/workflows/check-version.yml
+++ b/.github/workflows/check-version.yml
@@ -1,13 +1,75 @@
-# Check for changes in the upstream template. If changes are found, an issue is created
-name: Template check.
+# Check for changes in the upstream template. If changes are found, an issue is created.
+name: Template check
+
 on:
   workflow_dispatch:
   schedule:
     - cron: '0 0 1 * *' # Runs at 00:00 UTC on the 1st day of every month
 
+defaults:
+  run:
+    shell: bash --noprofile --norc -euo pipefail {0}
+
 jobs:
-  copier-update:
+  copier-check-update:
+    runs-on: ubuntu-latest
     permissions:
       contents: read
       issues: write
-    uses: modelblocks-org/data-module-template/.github/workflows/template-check-version.yml@latest
+    env:
+      ISSUE_TITLE: Template update available
+    steps:
+      - uses: actions/checkout@v4
+
+      - name: Install uv
+        uses: astral-sh/setup-uv@v5
+
+      - name: Check for template updates
+        id: copier_check_update
+        run: |
+          update_json="$(uvx --from 'copier>=9.15.2' copier check-update --output-format json)"
+          echo "$update_json"
+          {
+            echo "update_available=$(jq -r '.update_available // false' <<< "$update_json")"
+            echo "current_version=$(jq -r '.current_version // "unknown"' <<< "$update_json")"
+            echo "latest_version=$(jq -r '.latest_version // "unknown"' <<< "$update_json")"
+          } >> "$GITHUB_OUTPUT"
+
+      - name: Check for existing update issue
+        if: steps.copier_check_update.outputs.update_available == 'true'
+        id: existing_issue
+        run: |
+          issue_count="$(gh issue list \
+            --repo "${{ github.repository }}" \
+            --state open \
+            --search "$ISSUE_TITLE in:title" \
+            --json title \
+            --jq "map(select(.title == \"$ISSUE_TITLE\")) | length")"
+          if [[ "$issue_count" -gt 0 ]]; then
+            echo "exists=true" >> "$GITHUB_OUTPUT"
+          else
+            echo "exists=false" >> "$GITHUB_OUTPUT"
+          fi
+        env:
+          GH_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+
+      - name: Open update issue
+        if: steps.copier_check_update.outputs.update_available == 'true' && steps.existing_issue.outputs.exists != 'true'
+        run: |
+          gh issue create \
+            --repo "${{ github.repository }}" \
+            --title "$ISSUE_TITLE" \
+            --body "A new version of the Modelblocks data module template is available.
+
+          Current template version: ${{ steps.copier_check_update.outputs.current_version }}
+          Latest template version: ${{ steps.copier_check_update.outputs.latest_version }}
+
+          Please update this project using:
+
+          \`\`\`shell
+          copier update --skip-answered --defaults
+          \`\`\`
+
+          Review the resulting changes before merging them."
+        env:
+          GH_TOKEN: ${{ secrets.GITHUB_TOKEN }}
diff --git a/.github/workflows/release.yml b/.github/workflows/release.yml
deleted file mode 100644
index 7e25226..0000000
--- a/.github/workflows/release.yml
+++ /dev/null
@@ -1,11 +0,0 @@
-name: Release
-
-on:
-  release:
-    types: [released]
-
-jobs:
-  release-workflow:
-    permissions:
-      contents: write
-    uses: modelblocks-org/data-module-template/.github/workflows/template-release.yml@latest
diff --git a/.gitignore b/.gitignore
index f03928b..7210c19 100644
--- a/.gitignore
+++ b/.gitignore
@@ -12,7 +12,8 @@ __pycache__
 *.pyc
 
 ### Environments
-.pixi/
+.pixi/*
+!.pixi/.gitignore
 
 ### Snakemake
 .snakemake/
diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
index 45bc880..7e4a9a8 100644
--- a/.pre-commit-config.yaml
+++ b/.pre-commit-config.yaml
@@ -25,15 +25,15 @@ repos:
 
   # Python file formatting
   - repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.15.9
+    rev: v0.15.18
     hooks:
-      - id: ruff
+      - id: ruff-check
         args: [--fix, --exit-non-zero-on-fix]
       - id: ruff-format
 
   # Snakemake file formatting
   - repo: https://github.com/snakemake/snakefmt
-    rev: v1.0.0
+    rev: v2.0.2
     hooks:
       - id: snakefmt
 
diff --git a/AUTHORS b/AUTHORS
index 6ceaea1..dc14162 100644
--- a/AUTHORS
+++ b/AUTHORS
@@ -2,6 +2,6 @@ This is the list of contributors for copyright purposes.
 
 This does not necessarily list everyone who has contributed to this software's
 code or documentation. For a full contributor list, see:
-<https://github.com/calliope-project/module_geo_boundaries/graphs/contributors>
+<https://github.com/modelblocks-org/module_geo_boundaries/graphs/contributors>
 
 Ivan Ruiz Manuel, <i.ruizmanuel@tudelft.nl>
diff --git a/CITATION.cff b/CITATION.cff
index 19483e3..df0e497 100644
--- a/CITATION.cff
+++ b/CITATION.cff
@@ -3,10 +3,13 @@
 # https://citation-file-format.github.io/
 cff-version: 1.2.0
 message: If you use this software or data produced by it, please cite it using the metadata from this file.
-title: "Modelblocks - module_geo_boundaries"
+title: "Modelblocks - module_geo_boundaries: Geo-boundaries module"
 repository: "https://github.com/modelblocks-org/module_geo_boundaries"
 license: Apache-2.0
 authors:
   - given-names: Ivan
     family-names: Ruiz Manuel
     orcid: "0000-0003-2288-6423"
+  - given-names: Stefan
+    family-names: Pfenninger-Lee
+    orcid: "0000-0002-8420-9498"
diff --git a/INTERFACE.yaml b/INTERFACE.yaml
index b4b9ace..b7fea04 100644
--- a/INTERFACE.yaml
+++ b/INTERFACE.yaml
@@ -1,15 +1,17 @@
-# Module Input-Output structure for automated doc. generation
+# Module Input-Output structure for automated docs generation
+convention_version: v1.0.0
+
 pathvars:
   snakemake_defaults:
     logs:
       default: "<logs>"
-      description: location of rule log files.
+      description: location of snakemake log files.
     resources:
       default: "<resources>"
-      description: "location of module resource files."
+      description: "location of module resource (input) files."
     results:
       default: "<results>"
-      description: "location of module results."
+      description: "location of module result (output) files."
   results:
     shapes:
       default: "<results>/{scenario}/shapes.parquet"
diff --git a/README.md b/README.md
index 03bbeb7..dc92ae9 100644
--- a/README.md
+++ b/README.md
@@ -1,6 +1,6 @@
-# Modelblocks - Geo-boundaries module
+# Geo-boundaries module
 
-A module to create arbitrary regional boundary datasets for energy systems modelling
+A module to create arbitrary geopolitical boundary datasets for energy systems modelling.
 
 <!-- Place an attractive image of module outputs here -->
 <p align="center">
@@ -75,6 +75,21 @@ cd module_geo_boundaries
 pixi install --all
 ```
 
+Please be aware that this is a multi-environment project (see [pixi.toml](./pixi.toml) for details).
+- `default`: used for development and integration testing.
+Because it contains `Snakemake`, `conda` and `pytest` as dependencies it **should not be used** in `Snakemake` rules.
+- `module`: contains minimal dependencies used in `Snakemake` rules.
+If modified, be sure to export it to `Snakemake` so it can be recreated by module users:
+
+```shell
+# create module.yaml and conda-spec pin files in workflow/envs/
+pixi run export-snakemake-env module
+```
+
+
+## Testing
+<!-- Please do not modify this templated section -->
+
 For testing, simply run:
 
 ```shell
@@ -92,7 +107,7 @@ snakemake --use-conda --cores 2  # run the workflow!
 ## References
 <!-- Please provide thorough referencing below -->
 
-This module is based on the following research and datasets.
+This module is based on the following research and datasets:
 We encourage users to cite both the original source and our workflow.
 
 - eurostat NUTS (various years). Nomenclature of territorial units for statistics (NUTS).
@@ -107,3 +122,16 @@ We encourage users to cite both the original source and our workflow.
     - License: CC-By. See <https://www.marineregions.org/disclaimer.php>.
 - Overture Maps Divisions database (most recent version). Overture Maps Foundation.
     - License: ODbL. See <https://docs.overturemaps.org/attribution/> and <https://opendatacommons.org/licenses/odbl/summary/> for details.
+
+## Contributors ✨
+
+Thanks goes to these wonderful people, sorted alphabetically ([emoji key](https://allcontributors.org/en/reference/emoji-key/)):
+
+<!-- ALL-CONTRIBUTORS-LIST:START - Do not remove or modify this section -->
+<!-- prettier-ignore-start -->
+<!-- markdownlint-disable -->
+<!-- markdownlint-restore -->
+<!-- prettier-ignore-end -->
+<!-- ALL-CONTRIBUTORS-LIST:END -->
+
+This project follows the [all-contributors](https://github.com/all-contributors/all-contributors) specification. Contributions of any kind welcome!
diff --git a/figures/.gitkeep b/figures/.gitkeep
new file mode 100644
index 0000000..dcafcbe
--- /dev/null
+++ b/figures/.gitkeep
@@ -0,0 +1 @@
+# For module documentation figures
diff --git a/pixi.lock b/pixi.lock
index 6dc220e..eb9dc76 100644
--- a/pixi.lock
+++ b/pixi.lock
@@ -187,7 +187,7 @@ environments:
       - conda: https://conda.anaconda.org/conda-forge/noarch/certifi-2026.1.4-pyhd8ed1ab_0.conda
       - conda: https://conda.anaconda.org/conda-forge/noarch/charset-normalizer-3.4.4-pyhd8ed1ab_0.conda
       - conda: https://conda.anaconda.org/conda-forge/noarch/click-8.3.1-pyh8f84b5b_1.conda
-      - conda: https://conda.anaconda.org/conda-forge/noarch/clio-tools-2026.03.30-pyhd8ed1ab_0.conda
+      - conda: https://conda.anaconda.org/conda-forge/noarch/clio-tools-2026.06.23-pyhd8ed1ab_0.conda
       - conda: https://conda.anaconda.org/conda-forge/noarch/colorama-0.4.6-pyhd8ed1ab_1.conda
       - conda: https://conda.anaconda.org/conda-forge/noarch/comm-0.2.3-pyhe01879c_0.conda
       - conda: https://conda.anaconda.org/conda-forge/noarch/conda-inject-1.3.2-pyhd8ed1ab_0.conda
@@ -312,7 +312,7 @@ environments:
       - conda: https://conda.anaconda.org/conda-forge/noarch/certifi-2026.1.4-pyhd8ed1ab_0.conda
       - conda: https://conda.anaconda.org/conda-forge/noarch/charset-normalizer-3.4.4-pyhd8ed1ab_0.conda
       - conda: https://conda.anaconda.org/conda-forge/noarch/click-8.3.1-pyh8f84b5b_1.conda
-      - conda: https://conda.anaconda.org/conda-forge/noarch/clio-tools-2026.03.30-pyhd8ed1ab_0.conda
+      - conda: https://conda.anaconda.org/conda-forge/noarch/clio-tools-2026.06.23-pyhd8ed1ab_0.conda
       - conda: https://conda.anaconda.org/conda-forge/noarch/colorama-0.4.6-pyhd8ed1ab_1.conda
       - conda: https://conda.anaconda.org/conda-forge/noarch/comm-0.2.3-pyhe01879c_0.conda
       - conda: https://conda.anaconda.org/conda-forge/noarch/conda-inject-1.3.2-pyhd8ed1ab_0.conda
@@ -549,7 +549,7 @@ environments:
       - conda: https://conda.anaconda.org/conda-forge/noarch/certifi-2026.1.4-pyhd8ed1ab_0.conda
       - conda: https://conda.anaconda.org/conda-forge/noarch/charset-normalizer-3.4.4-pyhd8ed1ab_0.conda
       - conda: https://conda.anaconda.org/conda-forge/noarch/click-8.3.1-pyha7b4d00_1.conda
-      - conda: https://conda.anaconda.org/conda-forge/noarch/clio-tools-2026.03.30-pyhd8ed1ab_0.conda
+      - conda: https://conda.anaconda.org/conda-forge/noarch/clio-tools-2026.06.23-pyhd8ed1ab_0.conda
       - conda: https://conda.anaconda.org/conda-forge/noarch/colorama-0.4.6-pyhd8ed1ab_1.conda
       - conda: https://conda.anaconda.org/conda-forge/noarch/comm-0.2.3-pyhe01879c_0.conda
       - conda: https://conda.anaconda.org/conda-forge/noarch/conda-inject-1.3.2-pyhd8ed1ab_0.conda
@@ -767,9 +767,10 @@ environments:
       - conda: https://conda.anaconda.org/conda-forge/win-64/zeromq-4.3.5-h507cc87_10.conda
       - conda: https://conda.anaconda.org/conda-forge/win-64/zstandard-0.25.0-py313h5fd188c_1.conda
       - conda: https://conda.anaconda.org/conda-forge/win-64/zstd-1.5.7-h534d264_6.conda
-  shape:
+  module:
     channels:
     - url: https://conda.anaconda.org/conda-forge/
+    - url: https://conda.anaconda.org/bioconda/
     packages:
       linux-64:
       - conda: https://conda.anaconda.org/conda-forge/linux-64/_openmp_mutex-4.5-20_gnu.conda
@@ -788,10 +789,10 @@ environments:
       - conda: https://conda.anaconda.org/conda-forge/linux-64/aws-sdk-cpp-1.11.606-hc9b1074_13.conda
       - conda: https://conda.anaconda.org/conda-forge/linux-64/azure-core-cpp-1.16.2-h206d751_0.conda
       - conda: https://conda.anaconda.org/conda-forge/linux-64/azure-identity-cpp-1.13.3-hed0cdb0_1.conda
-      - conda: https://conda.anaconda.org/conda-forge/linux-64/azure-storage-blobs-cpp-12.16.0-hdd73cc9_1.conda
-      - conda: https://conda.anaconda.org/conda-forge/linux-64/azure-storage-common-cpp-12.12.0-ha7a2c86_1.conda
-      - conda: https://conda.anaconda.org/conda-forge/linux-64/azure-storage-files-datalake-cpp-12.14.0-h52c5a47_1.conda
-      - conda: https://conda.anaconda.org/conda-forge/linux-64/backports.zstd-1.4.0-py312h90b7ffd_0.conda
+      - conda: https://conda.anaconda.org/conda-forge/linux-64/azure-storage-blobs-cpp-12.16.0-hf824e48_2.conda
+      - conda: https://conda.anaconda.org/conda-forge/linux-64/azure-storage-common-cpp-12.13.0-ha7a2c86_0.conda
+      - conda: https://conda.anaconda.org/conda-forge/linux-64/azure-storage-files-datalake-cpp-12.14.0-h539c000_2.conda
+      - conda: https://conda.anaconda.org/conda-forge/linux-64/backports.zstd-1.6.0-py312h90b7ffd_0.conda
       - conda: https://conda.anaconda.org/conda-forge/linux-64/blosc-1.21.6-he440d0b_1.conda
       - conda: https://conda.anaconda.org/conda-forge/linux-64/brotli-1.2.0-hed03a55_1.conda
       - conda: https://conda.anaconda.org/conda-forge/linux-64/brotli-bin-1.2.0-hb03c661_1.conda
@@ -799,7 +800,7 @@ environments:
       - conda: https://conda.anaconda.org/conda-forge/linux-64/bzip2-1.0.8-hda65f42_9.conda
       - conda: https://conda.anaconda.org/conda-forge/linux-64/c-ares-1.34.6-hb03c661_0.conda
       - conda: https://conda.anaconda.org/conda-forge/linux-64/contourpy-1.3.3-py312h0a2e395_4.conda
-      - conda: https://conda.anaconda.org/conda-forge/linux-64/fonttools-4.62.1-py312h8a5da7c_0.conda
+      - conda: https://conda.anaconda.org/conda-forge/linux-64/fonttools-4.63.0-py312h8a5da7c_0.conda
       - conda: https://conda.anaconda.org/conda-forge/linux-64/freetype-2.14.3-ha770c72_0.conda
       - conda: https://conda.anaconda.org/conda-forge/linux-64/freexl-2.0.0-h9dce30a_2.conda
       - conda: https://conda.anaconda.org/conda-forge/linux-64/geos-3.14.0-h480dda7_0.conda
@@ -811,28 +812,28 @@ environments:
       - conda: https://conda.anaconda.org/conda-forge/linux-64/json-c-0.18-h6688a6e_0.conda
       - conda: https://conda.anaconda.org/conda-forge/linux-64/keyutils-1.6.3-hb9d3cd8_0.conda
       - conda: https://conda.anaconda.org/conda-forge/linux-64/kiwisolver-1.5.0-py312h0a2e395_0.conda
-      - conda: https://conda.anaconda.org/conda-forge/linux-64/krb5-1.22.2-ha1258a1_0.conda
-      - conda: https://conda.anaconda.org/conda-forge/linux-64/lcms2-2.19.1-h0c24ade_0.conda
+      - conda: https://conda.anaconda.org/conda-forge/linux-64/krb5-1.22.2-hbde042b_1.conda
+      - conda: https://conda.anaconda.org/conda-forge/linux-64/lcms2-2.19.1-h0c24ade_1.conda
       - conda: https://conda.anaconda.org/conda-forge/linux-64/ld_impl_linux-64-2.45.1-default_hbd61a6d_102.conda
       - conda: https://conda.anaconda.org/conda-forge/linux-64/lerc-4.1.0-hdb68285_0.conda
       - conda: https://conda.anaconda.org/conda-forge/linux-64/libabseil-20260107.1-cxx17_h7b12aa8_0.conda
-      - conda: https://conda.anaconda.org/conda-forge/linux-64/libarchive-3.8.7-gpl_hc2c16d8_100.conda
+      - conda: https://conda.anaconda.org/conda-forge/linux-64/libarchive-3.8.8-gpl_hc2c16d8_100.conda
       - conda: https://conda.anaconda.org/conda-forge/linux-64/libarrow-19.0.1-h3c191e6_45_cpu.conda
       - conda: https://conda.anaconda.org/conda-forge/linux-64/libarrow-acero-19.0.1-h635bf11_45_cpu.conda
       - conda: https://conda.anaconda.org/conda-forge/linux-64/libarrow-dataset-19.0.1-h635bf11_45_cpu.conda
       - conda: https://conda.anaconda.org/conda-forge/linux-64/libarrow-substrait-19.0.1-hb4dd7c2_45_cpu.conda
-      - conda: https://conda.anaconda.org/conda-forge/linux-64/libblas-3.11.0-6_h4a7cf45_openblas.conda
+      - conda: https://conda.anaconda.org/conda-forge/linux-64/libblas-3.11.0-8_h4a7cf45_openblas.conda
       - conda: https://conda.anaconda.org/conda-forge/linux-64/libbrotlicommon-1.2.0-hb03c661_1.conda
       - conda: https://conda.anaconda.org/conda-forge/linux-64/libbrotlidec-1.2.0-hb03c661_1.conda
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-      - conda: https://conda.anaconda.org/conda-forge/linux-64/libcblas-3.11.0-6_h0358290_openblas.conda
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@@ -1632,6 +1638,9 @@ packages:
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   license: BSD-3-Clause
   license_family: BSD
+  run_exports:
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   size: 28948
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 - conda: https://conda.anaconda.org/conda-forge/linux-64/_openmp_mutex-4.5-2_gnu.tar.bz2
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   license: Apache-2.0
   license_family: APACHE
+  run_exports:
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 - conda: https://conda.anaconda.org/conda-forge/linux-64/aws-c-cal-0.9.13-h2c9d079_1.conda
@@ -1712,6 +1724,9 @@ packages:
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   license: Apache-2.0
   license_family: Apache
+  run_exports:
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 - conda: https://conda.anaconda.org/conda-forge/linux-64/aws-c-common-0.12.6-hb03c661_0.conda
@@ -1722,6 +1737,9 @@ packages:
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   license: Apache-2.0
   license_family: Apache
+  run_exports:
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 - conda: https://conda.anaconda.org/conda-forge/linux-64/aws-c-compression-0.3.2-h8b1a151_0.conda
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   license: Apache-2.0
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+  run_exports:
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   license: Apache-2.0
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 - conda: https://conda.anaconda.org/conda-forge/linux-64/aws-c-http-0.10.10-hf621c6d_0.conda
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   license: Apache-2.0
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+  run_exports:
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 - conda: https://conda.anaconda.org/conda-forge/linux-64/aws-c-io-0.26.1-hc87160b_2.conda
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   license: Apache-2.0
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+  run_exports:
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 - conda: https://conda.anaconda.org/conda-forge/linux-64/aws-c-mqtt-0.14.0-ha25ca29_1.conda
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   license: Apache-2.0
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 - conda: https://conda.anaconda.org/conda-forge/linux-64/aws-c-s3-0.11.5-h9b5df67_3.conda
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   timestamp: 1771617915831
 - conda: https://conda.anaconda.org/conda-forge/linux-64/libarrow-acero-19.0.1-h635bf11_45_cpu.conda
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   - libstdcxx >=14
   license: Apache-2.0
   license_family: APACHE
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   timestamp: 1771618002273
 - conda: https://conda.anaconda.org/conda-forge/linux-64/libarrow-dataset-19.0.1-h635bf11_45_cpu.conda
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   license_family: APACHE
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 - conda: https://conda.anaconda.org/conda-forge/linux-64/libarrow-substrait-19.0.1-hb4dd7c2_45_cpu.conda
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   - libstdcxx >=14
   license: Apache-2.0
   license_family: APACHE
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-  - liblapacke 3.11.0   6*_openblas
-  - libcblas   3.11.0   6*_openblas
-  - mkl <2026
+- conda: https://conda.anaconda.org/conda-forge/linux-64/libblas-3.11.0-8_h4a7cf45_openblas.conda
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+  - liblapacke 3.11.0   8*_openblas
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   license_family: BSD
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-  timestamp: 1774503034895
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   md5: 72c8fd1af66bd67bf580645b426513ed
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   license: MIT
   license_family: MIT
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 - conda: https://conda.anaconda.org/conda-forge/linux-64/libbrotlidec-1.2.0-hb03c661_1.conda
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   license_family: MIT
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   license: MIT
   license_family: MIT
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-  md5: 36ae340a916635b97ac8a0655ace2a35
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-  - liblapack  3.11.0   6*_openblas
-  - liblapacke 3.11.0   6*_openblas
+  - blas 2.308   openblas
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+  - liblapack  3.11.0   8*_openblas
   license: BSD-3-Clause
   license_family: BSD
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-  timestamp: 1774503050205
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   license: BSD-3-Clause
   license_family: BSD
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 - conda: https://conda.anaconda.org/conda-forge/linux-64/libcups-2.3.3-h7a8fb5f_6.conda
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   timestamp: 1773218522665
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-  md5: c3cc2864f82a944bc90a7beb4d3b0e88
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   - libssh2 >=1.11.1,<2.0a0
   - libzlib >=1.3.2,<2.0a0
-  - openssl >=3.5.6,<4.0a0
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   - zstd >=1.5.7,<1.6.0a0
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   license_family: MIT
-  size: 468706
-  timestamp: 1777461492876
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@@ -3050,6 +3229,9 @@ packages:
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   license: MIT
   license_family: MIT
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   license_family: BSD
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 - conda: https://conda.anaconda.org/conda-forge/linux-64/libegl-1.7.0-ha4b6fd6_2.conda
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   - libgcc-ng >=12
   license: BSD-2-Clause
   license_family: BSD
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   timestamp: 1702146165126
 - conda: https://conda.anaconda.org/conda-forge/linux-64/libevent-2.1.12-hf998b51_1.conda
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   license: BSD-3-Clause
   license_family: BSD
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   timestamp: 1685725977222
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   timestamp: 1763549731408
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-  md5: a3b390520c563d78cc58974de95a03e5
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+  md5: b24d3c612f71e7aa74158d92106318b2
   depends:
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   - libgcc >=14
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   license: MIT
   license_family: MIT
-  size: 77241
-  timestamp: 1777846112704
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   license: MIT
   license_family: MIT
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   timestamp: 1769456073053
 - conda: https://conda.anaconda.org/conda-forge/linux-64/libffi-3.5.2-h9ec8514_0.conda
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   license: GPL-2.0-only OR FTL
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   license: GPL-3.0-only WITH GCC-exception-3.1
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   license: GPL-3.0-only WITH GCC-exception-3.1
   license_family: GPL
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   license: MIT
   license_family: MIT
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 - conda: https://conda.anaconda.org/conda-forge/linux-64/libgfortran-15.2.0-h69a702a_16.conda
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   license_family: GPL
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   license_family: GPL
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   license: GPL-3.0-only WITH GCC-exception-3.1
   license_family: GPL
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   - libgoogle-cloud 2.39.0 *_1
   license: Apache-2.0
   license_family: Apache
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 - conda: https://conda.anaconda.org/conda-forge/linux-64/libgoogle-cloud-storage-2.39.0-hdbdcf42_1.conda
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   license: Apache-2.0
   license_family: Apache
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   license: Apache-2.0
   license_family: APACHE
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   - libgcc >=14
   license: LGPL-2.1-only
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   - jpeg <0.0.0a
   license: IJG AND BSD-3-Clause AND Zlib
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 - conda: https://conda.anaconda.org/conda-forge/linux-64/libkml-1.3.0-haa4a5bd_1023.conda
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   license: BSD-3-Clause
   license_family: BSD
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-  - liblapacke 3.11.0   6*_openblas
-  - libcblas   3.11.0   6*_openblas
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   license_family: BSD
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-  timestamp: 1774503065378
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   - xz 5.8.3.*
   license: 0BSD
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   license_family: MIT
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   license: LGPL-2.1-only
   license_family: GPL
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   license_family: BSD
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 - conda: https://conda.anaconda.org/conda-forge/osx-arm64/giflib-5.2.2-h93a5062_0.conda
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   license: MIT
   license_family: MIT
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 - conda: https://conda.anaconda.org/conda-forge/osx-arm64/glib-tools-2.86.3-hb9d6e3a_0.conda
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   - libcxx >=16
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   license_family: BSD
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 - conda: https://conda.anaconda.org/conda-forge/osx-arm64/graphite2-1.3.14-hec049ff_2.conda
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   license_family: MIT
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 - conda: https://conda.anaconda.org/conda-forge/osx-arm64/immutables-0.21-py313hcdf3177_2.conda
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   license: MIT
   license_family: MIT
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   - python_abi 3.13.* *_cp313
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   license_family: BSD
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-  md5: e5ba982008c0ac1a1c0154617371bab5
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   - libcxx >=19
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   license_family: Apache
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 - conda: https://conda.anaconda.org/conda-forge/osx-arm64/libabseil-20260107.1-cxx17_h2062a1b_0.conda
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   - libabseil-static =20260107.1=cxx17*
   license: Apache-2.0
   license_family: Apache
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+    - libabseil >=20260107.1,<20260108.0a0
+    - libabseil =*=cxx17*
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   timestamp: 1770863511331
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-  md5: 014dc9c74fef186581342c4844591ac6
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   - lzo >=2.10,<3.0a0
-  - openssl >=3.5.6,<4.0a0
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   license_family: BSD
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-  timestamp: 1776099129217
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   - arrow-cpp <0.0a0
   license: Apache-2.0
   license_family: APACHE
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 - conda: https://conda.anaconda.org/conda-forge/osx-arm64/libarrow-acero-19.0.1-h0f28eaf_45_cpu.conda
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   license: Apache-2.0
   license_family: APACHE
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 - conda: https://conda.anaconda.org/conda-forge/osx-arm64/libarrow-dataset-19.0.1-h0f28eaf_45_cpu.conda
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   license: Apache-2.0
   license_family: APACHE
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 - conda: https://conda.anaconda.org/conda-forge/osx-arm64/libarrow-substrait-19.0.1-h8746646_45_cpu.conda
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   license_family: APACHE
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-  - blas 2.306   openblas
-  - libcblas   3.11.0   6*_openblas
-  - mkl <2026
+- conda: https://conda.anaconda.org/conda-forge/osx-arm64/libblas-3.11.0-8_h51639a9_openblas.conda
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+  - liblapacke 3.11.0   8*_openblas
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   license_family: BSD
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 - conda: https://conda.anaconda.org/conda-forge/osx-arm64/libbrotlidec-1.2.0-hc919400_1.conda
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   license: MIT
   license_family: MIT
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 - conda: https://conda.anaconda.org/conda-forge/osx-arm64/libbrotlienc-1.2.0-hc919400_1.conda
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   license: MIT
   license_family: MIT
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   timestamp: 1764018009077
 - conda: https://conda.anaconda.org/conda-forge/osx-arm64/libcblas-3.11.0-5_hb0561ab_openblas.conda
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-  - blas 2.306   openblas
-  - liblapack  3.11.0   6*_openblas
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   license_family: BSD
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-- conda: https://conda.anaconda.org/conda-forge/osx-arm64/libcurl-8.20.0-hd5a2499_0.conda
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   license_family: MIT
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-  timestamp: 1777462251987
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   license_family: MIT
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   license: BSD-2-Clause
   license_family: BSD
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   license: BSD-2-Clause
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   license: BSD-3-Clause
   license_family: BSD
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-  timestamp: 1777846180142
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   license_family: MIT
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-- conda: https://conda.anaconda.org/conda-forge/osx-arm64/libfreetype-2.14.3-hce30654_0.conda
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   license: GPL-2.0-only OR FTL
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   license_family: GPL
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 - conda: https://conda.anaconda.org/conda-forge/osx-arm64/libgd-2.3.3-h05bcc79_12.conda
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 - conda: https://conda.anaconda.org/conda-forge/osx-arm64/libgfortran-15.2.0-h07b0088_16.conda
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   license_family: GPL
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   license_family: GPL
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   license_family: Apache
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 - conda: https://conda.anaconda.org/conda-forge/osx-arm64/libgoogle-cloud-storage-2.39.0-ha114238_1.conda
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   license_family: Apache
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 - conda: https://conda.anaconda.org/conda-forge/osx-arm64/libgrpc-1.78.1-h3e3f78d_0.conda
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   license: Apache-2.0
   license_family: APACHE
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 - conda: https://conda.anaconda.org/conda-forge/osx-arm64/libkml-1.3.0-hb833057_1023.conda
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-  md5: ee33d2d05a7c5ea1f67653b37eb74db1
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-  - libcblas   3.11.0   6*_openblas
-  - blas 2.306   openblas
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-  timestamp: 1774504467905
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 - conda: https://conda.anaconda.org/conda-forge/osx-arm64/libmamba-2.4.0-h204cf41_2.conda
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 - conda: https://conda.anaconda.org/conda-forge/osx-arm64/libnghttp2-1.67.0-hc438710_0.conda
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   license: Apache-2.0
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 - conda: https://conda.anaconda.org/conda-forge/osx-arm64/libpng-1.6.53-hfab5511_0.conda
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   license: zlib-acknowledgement
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-  - liblapacke 3.11.0   6*_mkl
-  - libcblas   3.11.0   6*_mkl
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+  - liblapacke 3.11.0   8*_mkl
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   license: BSD-3-Clause
   license_family: BSD
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-  timestamp: 1774503757128
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@@ -12562,6 +13706,9 @@ packages:
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   license: 0BSD
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   timestamp: 1775825663227
 - conda: https://conda.anaconda.org/conda-forge/win-64/libmamba-2.4.0-h6617762_2.conda
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   license: BSD-2-Clause
   license_family: BSD
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   timestamp: 1769482314283
 - conda: https://conda.anaconda.org/conda-forge/win-64/libparquet-19.0.1-h7051d1f_45_cpu.conda
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   license: Apache-2.0
   license_family: APACHE
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   - libzlib >=1.3.2,<2.0a0
   license: zlib-acknowledgement
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   license: BSD-3-Clause
   license_family: BSD
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-  timestamp: 1769749718218
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   license_family: BSD
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 - conda: https://conda.anaconda.org/conda-forge/win-64/librttopo-1.1.0-h5ff11c1_19.conda
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   license: GPL-2.0-or-later
   license_family: GPL
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   - zlib
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   license_family: MOZILLA
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 - conda: https://conda.anaconda.org/conda-forge/win-64/libsqlite-3.51.1-hf5d6505_1.conda
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-  md5: 7fea434a17c323256acc510a041b80d7
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   license: blessing
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-  timestamp: 1777986510497
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   license_family: BSD
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   license_family: BSD
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   - msys2-conda-epoch <0.0a0
   license: MIT AND BSD-3-Clause-Clear
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 - conda: https://conda.anaconda.org/conda-forge/win-64/libxcb-1.17.0-h0e4246c_0.conda
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   license_family: MIT
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   license_family: MIT
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 - conda: https://conda.anaconda.org/conda-forge/win-64/libxml2-2.15.1-h779ef1b_1.conda
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   license: MIT
   license_family: MIT
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   license_family: MIT
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   - zlib 1.3.2 *_2
   license: Zlib
   license_family: Other
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   - intel-openmp <0.0a0
-  - openmp 22.1.4|22.1.4.*
   license: Apache-2.0 WITH LLVM-exception
   license_family: APACHE
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   license: LicenseRef-IntelSimplifiedSoftwareOct2022
   license_family: Proprietary
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   license_family: BSD
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   license_family: BSD
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   size: 109246
   timestamp: 1762977105140
 - conda: https://conda.anaconda.org/conda-forge/win-64/xorg-libxdmcp-1.1.5-hba3369d_1.conda
@@ -14220,6 +15557,9 @@ packages:
   - ucrt >=10.0.20348.0
   license: MIT
   license_family: MIT
+  run_exports:
+    weak:
+    - xorg-libxdmcp >=1.1.5,<2.0a0
   size: 70691
   timestamp: 1762977015220
 - conda: https://conda.anaconda.org/conda-forge/win-64/xorg-libxext-1.3.6-h0e40799_0.conda
@@ -14274,6 +15614,9 @@ packages:
   - ucrt >=10.0.20348.0
   license: MIT
   license_family: MIT
+  run_exports:
+    weak:
+    - yaml >=0.2.5,<0.3.0a0
   size: 63944
   timestamp: 1753484092156
 - conda: https://conda.anaconda.org/conda-forge/win-64/yaml-cpp-0.8.0-he0c23c2_0.conda
@@ -14313,6 +15656,9 @@ packages:
   - vc14_runtime >=14.44.35208
   license: Zlib
   license_family: Other
+  run_exports:
+    weak:
+    - libzlib >=1.3.2,<2.0a0
   size: 850351
   timestamp: 1774072891049
 - conda: https://conda.anaconda.org/conda-forge/win-64/zlib-ng-2.3.3-h0261ad2_1.conda
@@ -14324,6 +15670,9 @@ packages:
   - vc14_runtime >=14.44.35208
   license: Zlib
   license_family: Other
+  run_exports:
+    weak:
+    - zlib-ng >=2.3.3,<2.4.0a0
   size: 124542
   timestamp: 1770167984883
 - conda: https://conda.anaconda.org/conda-forge/win-64/zstandard-0.25.0-py313h5fd188c_1.conda
@@ -14355,5 +15704,8 @@ packages:
   - libzlib >=1.3.1,<2.0a0
   license: BSD-3-Clause
   license_family: BSD
+  run_exports:
+    weak:
+    - zstd >=1.5.7,<1.6.0a0
   size: 388453
   timestamp: 1764777142545
diff --git a/pixi.toml b/pixi.toml
index c423cd1..6b6adb6 100644
--- a/pixi.toml
+++ b/pixi.toml
@@ -1,7 +1,7 @@
 [workspace]
 name = "module_geo_boundaries"
 authors = ["See AUTHORS file"]
-description = "A module to create arbitrary regional boundary datasets for energy systems modelling"
+description = "A module to create arbitrary geopolitical boundary datasets for energy systems modelling."
 license = "Apache-2.0"
 readme = "README.md"
 channels = ["conda-forge", "bioconda"]
@@ -9,7 +9,7 @@ platforms = ["win-64", "linux-64", "osx-arm64"]
 homepage = "https://www.modelblocks.org/"
 
 [dependencies]
-clio-tools = ">=2026.03.30"
+clio-tools = ">=2026.06.23"
 conda = ">=25.0.0"
 ipdb = ">=0.13.13"
 ipykernel = ">=6.29.5"
@@ -19,59 +19,48 @@ pytest = ">=8.3.5"
 python = ">=3.12"
 ruff = ">=0.9.9"
 snakefmt = ">=0.10.2"
-snakemake-minimal = ">=8.29.0"
+snakemake-minimal = ">=9.19.0"
 pytz = ">=2026.1.post1"
 
+[feature.module.dependencies]
+boto3 = ">=1.40.46"
+duckdb = ">=1.2.0"
+geopandas = ">=1.1.3"
+ipdb = ">=0.13.13"
+pandera-geopandas = ">=0.24"
+pandera-io = ">=0.24"
+pyarrow = ">=19.0.1"
+pycountry = ">=24.6.1"
+shapely = ">=2.1.1"
+numpy = ">=2.3.5"
+pandas = ">=3.0.2"
+pytz = ">=2026.2"
+requests = ">=2.33.1"
+antimeridian = ">=0.4.7"
+rasterio = ">=1.4.4"
+
+[environments]
+module = { features = ["module"], no-default-feature = true }
+
 [tasks]
 test-integration = {cmd = "pytest tests/integration_test.py"}
 
-[tasks.export-conda-spec]
-description = "Export one pixi environment/platform as a conda explicit spec"
-args = ["env", "platform"]
-cmd = "pixi workspace export conda-explicit-spec --environment '{{ env }}' --platform '{{ platform }}' workflow/envs/"
-
-[tasks.rename-conda-spec]
-description = "Rename one pixi conda explicit spec to a Snakemake pin file"
-args = ["env", "platform"]
-cmd = "mv workflow/envs/{{ env }}_{{ platform }}_conda_spec.txt workflow/envs/{{ env }}.{{ platform }}.pin.txt"
-
-[tasks.export-snakemake-pin]
-description = "Export one pixi environment/platform as a Snakemake-compatible conda pin file"
-args = ["env", "platform"]
-depends-on = [
-  { task = "export-conda-spec", args = ["{{ env }}", "{{ platform }}"] },
-  { task = "rename-conda-spec", args = ["{{ env }}", "{{ platform }}"] },
-]
 
 [tasks.export-snakemake-env]
-description = "Export one pixi environment as a Snakemake conda environment"
-args = ["env"]
+description = "Export one Pixi environment as Snakemake-compatible conda files"
+args = ["env", { arg = "outdir", default = "workflow/envs" }]
 depends-on = [
-  { task = "export-snakemake-pin", args = ["{{ env }}", "win-64"] },
-  { task = "export-snakemake-pin", args = ["{{ env }}", "linux-64"] },
-  { task = "export-snakemake-pin", args = ["{{ env }}", "osx-arm64"] },
+  { task = "_export-snakemake-pin", args = ["{{ env }}", "win-64", "{{ outdir }}"] },
+  { task = "_export-snakemake-pin", args = ["{{ env }}", "linux-64", "{{ outdir }}"] },
+  { task = "_export-snakemake-pin", args = ["{{ env }}", "osx-arm64", "{{ outdir }}"] },
 ]
-cmd = "pixi workspace export conda-environment --environment '{{ env }}' workflow/envs/{{ env }}.yaml"
-
-[feature.shape]
-channels = ["conda-forge"]
+cmd = "pixi workspace export conda-environment --environment '{{ env }}' '{{ outdir }}/{{ env }}.yaml'"
 
-[feature.shape.dependencies]
-boto3 = "1.40.46.*"
-duckdb = "1.2.0.*"
-geopandas = "1.1.3.*"
-ipdb = "0.13.13.*"
-pandera-geopandas = "0.24.*"
-pandera-io = "0.24.*"
-pyarrow = "19.0.1.*"
-pycountry = "24.6.1.*"
-shapely = "2.1.1.*"
-numpy = "2.3.5.*"
-pandas = "3.0.2.*"
-pytz = "2026.2.*"
-requests = "2.33.1.*"
-antimeridian = "0.4.7.*"
-rasterio = "1.4.4.*"
-
-[environments]
-shape = { features = ["shape"], no-default-feature = true }
+[tasks._export-snakemake-pin]
+description = "Export one Pixi environment/platform as a Snakemake-compatible pin file"
+args = ["env", "platform", { arg = "outdir", default = "workflow/envs" }]
+cmd = """
+set -e
+pixi workspace export conda-explicit-spec --environment '{{ env }}' --platform '{{ platform }}' '{{ outdir }}'
+mv '{{ outdir }}/{{ env }}_{{ platform }}_conda_spec.txt' '{{ outdir }}/{{ env }}.{{ platform }}.pin.txt'
+"""
diff --git a/tests/integration_test.py b/tests/integration_test.py
index 7210a3a..e20dba3 100644
--- a/tests/integration_test.py
+++ b/tests/integration_test.py
@@ -4,6 +4,7 @@
 Contents may be updated in future template updates.
 """
 
+import json
 import subprocess
 from pathlib import Path
 
@@ -11,6 +12,46 @@
 from clio_tools.data_module import ModuleInterface
 
 
+@pytest.fixture(scope="module")
+def pixi_environments(module_path) -> dict:
+    """Pixi environments defined for this project."""
+    process = subprocess.run(
+        ["pixi", "info", "--json"],
+        check=True,
+        cwd=module_path,
+        capture_output=True,
+        text=True,
+    )
+    return {
+        environment["name"]: environment
+        for environment in json.loads(process.stdout)["environments_info"]
+    }
+
+
+def test_snakemake_environments(module_path, pixi_environments, tmp_path):
+    """All Snakemake environment files should be based on pixi counterparts."""
+    env_dir = module_path / "workflow/envs"
+    env_files = sorted(env_dir.glob("*.yaml"))
+    assert env_files, f"No conda environments found in {module_path}."
+
+    for env_file in env_files:
+        env_name = env_file.stem
+
+        output_dir = tmp_path / env_name
+        subprocess.run(
+            ["pixi", "run", "export-snakemake-env", env_name, str(output_dir)],
+            check=True,
+            cwd=module_path,
+        )
+
+        generated_yaml = output_dir / env_file.name
+        assert generated_yaml.read_text() == env_file.read_text()
+
+        for platform in pixi_environments[env_name]["platforms"]:
+            pin_file = env_dir / f"{env_name}.{platform}.pin.txt"
+            assert pin_file.exists(), f"{env_name} has no conda pins for {platform}"
+
+
 def test_interface_file(module_path):
     """The interfacing file should be correct."""
     assert ModuleInterface.from_yaml(module_path / "INTERFACE.yaml")
@@ -39,7 +80,7 @@ def test_snakemake_all_failure(module_path):
     process = subprocess.run(
         "snakemake --cores 1", shell=True, cwd=module_path, capture_output=True
     )
-    assert "INVALID (missing locally)" in str(process.stderr)
+    assert "INVALID" in str(process.stderr)
 
 
 def test_snakemake_integration_testing(module_path):
diff --git a/workflow/Snakefile b/workflow/Snakefile
index 6ff7a30..cb9e67e 100644
--- a/workflow/Snakefile
+++ b/workflow/Snakefile
@@ -50,7 +50,7 @@ rule all:
     log:
         stderr="<logs>/all.stderr",
     conda:
-        "envs/shell.yaml"
+        "envs/module.yaml"
     message:
         "ERROR: Invalid `rule all:` call"
     shell:
diff --git a/workflow/envs/shape.linux-64.pin.txt b/workflow/envs/module.linux-64.pin.txt
similarity index 85%
rename from workflow/envs/shape.linux-64.pin.txt
rename to workflow/envs/module.linux-64.pin.txt
index cdcaf4b..895cb1d 100644
--- a/workflow/envs/shape.linux-64.pin.txt
+++ b/workflow/envs/module.linux-64.pin.txt
@@ -9,16 +9,16 @@ https://conda.anaconda.org/conda-forge/linux-64/libgcc-15.2.0-he0feb66_19.conda#
 https://conda.anaconda.org/conda-forge/linux-64/tk-8.6.13-noxft_h366c992_103.conda#cffd3bdd58090148f4cfcd831f4b26ab
 https://conda.anaconda.org/conda-forge/linux-64/ncurses-6.6-hdb14827_0.conda#fc21868a1a5aacc937e7a18747acb8a5
 https://conda.anaconda.org/conda-forge/linux-64/readline-8.3-h853b02a_0.conda#d7d95fc8287ea7bf33e0e7116d2b95ec
-https://conda.anaconda.org/conda-forge/noarch/ca-certificates-2026.4.22-hbd8a1cb_0.conda#e18ad67cf881dcadee8b8d9e2f8e5f73
-https://conda.anaconda.org/conda-forge/linux-64/openssl-3.6.2-h35e630c_0.conda#da1b85b6a87e141f5140bb9924cecab0
+https://conda.anaconda.org/conda-forge/noarch/ca-certificates-2026.6.17-hbd8a1cb_0.conda#a9965dd99f683c5f444428f896635716
+https://conda.anaconda.org/conda-forge/linux-64/openssl-3.6.3-h35e630c_0.conda#79dd2074b5cd5c5c6b2930514a11e22d
 https://conda.anaconda.org/conda-forge/linux-64/libgcc-ng-15.2.0-h69a702a_19.conda#331ee9b72b9dff570d56b1302c5ab37d
 https://conda.anaconda.org/conda-forge/linux-64/libxcrypt-4.4.36-hd590300_1.conda#5aa797f8787fe7a17d1b0821485b5adc
-https://conda.anaconda.org/conda-forge/linux-64/libuuid-2.42-h5347b49_0.conda#38ffe67b78c9d4de527be8315e5ada2c
-https://conda.anaconda.org/conda-forge/linux-64/libsqlite-3.53.1-h0c1763c_0.conda#7dc38adcbf71e6b38748e919e16e0dce
+https://conda.anaconda.org/conda-forge/linux-64/libuuid-2.42.2-h5347b49_0.conda#01bb81d12c957de066ea7362007df642
+https://conda.anaconda.org/conda-forge/linux-64/libsqlite-3.53.2-h0c1763c_0.conda#062b0ac602fb0adf250e3dfa86f221c4
 https://conda.anaconda.org/conda-forge/linux-64/libnsl-2.0.1-hb9d3cd8_1.conda#d864d34357c3b65a4b731f78c0801dc4
 https://conda.anaconda.org/conda-forge/linux-64/liblzma-5.8.3-hb03c661_0.conda#b88d90cad08e6bc8ad540cb310a761fb
 https://conda.anaconda.org/conda-forge/linux-64/libffi-3.5.2-h3435931_0.conda#a360c33a5abe61c07959e449fa1453eb
-https://conda.anaconda.org/conda-forge/linux-64/libexpat-2.8.0-hecca717_0.conda#a3b390520c563d78cc58974de95a03e5
+https://conda.anaconda.org/conda-forge/linux-64/libexpat-2.8.1-hecca717_1.conda#b24d3c612f71e7aa74158d92106318b2
 https://conda.anaconda.org/conda-forge/linux-64/zstd-1.5.7-hb78ec9c_6.conda#4a13eeac0b5c8e5b8ab496e6c4ddd829
 https://conda.anaconda.org/conda-forge/linux-64/ld_impl_linux-64-2.45.1-default_hbd61a6d_102.conda#18335a698559cdbcd86150a48bf54ba6
 https://conda.anaconda.org/conda-forge/linux-64/bzip2-1.0.8-hda65f42_9.conda#d2ffd7602c02f2b316fd921d39876885
@@ -28,14 +28,14 @@ https://conda.anaconda.org/conda-forge/noarch/python_abi-3.12-8_cp312.conda#c3ef
 https://conda.anaconda.org/conda-forge/linux-64/libstdcxx-15.2.0-h934c35e_19.conda#5794b3bdc38177caf969dabd3af08549
 https://conda.anaconda.org/conda-forge/linux-64/libgfortran5-15.2.0-h68bc16d_19.conda#85072b0ad177c966294f129b7c04a2d5
 https://conda.anaconda.org/conda-forge/linux-64/libgfortran-15.2.0-h69a702a_19.conda#42bf7eca1a951735fa06c0e3c0d5c8e6
-https://conda.anaconda.org/conda-forge/linux-64/libopenblas-0.3.32-pthreads_h94d23a6_0.conda#89d61bc91d3f39fda0ca10fcd3c68594
-https://conda.anaconda.org/conda-forge/linux-64/libblas-3.11.0-6_h4a7cf45_openblas.conda#6d6d225559bfa6e2f3c90ee9c03d4e2e
-https://conda.anaconda.org/conda-forge/linux-64/liblapack-3.11.0-6_h47877c9_openblas.conda#881d801569b201c2e753f03c84b85e15
-https://conda.anaconda.org/conda-forge/linux-64/libcblas-3.11.0-6_h0358290_openblas.conda#36ae340a916635b97ac8a0655ace2a35
+https://conda.anaconda.org/conda-forge/linux-64/libopenblas-0.3.33-pthreads_h94d23a6_0.conda#2d3278b721e40468295ca755c3b84070
+https://conda.anaconda.org/conda-forge/linux-64/libblas-3.11.0-8_h4a7cf45_openblas.conda#00fc660ab1b2f5ca07e92b4900d10c79
+https://conda.anaconda.org/conda-forge/linux-64/liblapack-3.11.0-8_h47877c9_openblas.conda#809be8ba8712c77bc7d44c2d99390dc4
+https://conda.anaconda.org/conda-forge/linux-64/libcblas-3.11.0-8_h0358290_openblas.conda#33a413f1095f8325e5c30fde3b0d2445
 https://conda.anaconda.org/conda-forge/linux-64/numpy-2.3.5-py312h33ff503_1.conda#03baecffb72fa96fe234fd505908065f
 https://conda.anaconda.org/conda-forge/noarch/snuggs-1.4.7-pyhd8ed1ab_2.conda#9aa358575bbd4be126eaa5e0039f835c
 https://conda.anaconda.org/conda-forge/noarch/setuptools-82.0.1-pyh332efcf_0.conda#8e194e7b992f99a5015edbd4ebd38efd
-https://conda.anaconda.org/conda-forge/linux-64/sqlite-3.53.1-hbc0de68_0.conda#8e0b8654ead18e50af552e54b5a08a61
+https://conda.anaconda.org/conda-forge/linux-64/sqlite-3.53.2-hbc0de68_0.conda#38d9bf35a4cc83094a327811e548b660
 https://conda.anaconda.org/conda-forge/linux-64/libwebp-base-1.6.0-hd42ef1d_0.conda#aea31d2e5b1091feca96fcfe945c3cf9
 https://conda.anaconda.org/conda-forge/linux-64/libjpeg-turbo-3.1.4.1-hb03c661_0.conda#6178c6f2fb254558238ef4e6c56fb782
 https://conda.anaconda.org/conda-forge/linux-64/libdeflate-1.25-h17f619e_0.conda#6c77a605a7a689d17d4819c0f8ac9a00
@@ -47,8 +47,8 @@ https://conda.anaconda.org/conda-forge/linux-64/c-ares-1.34.6-hb03c661_0.conda#9
 https://conda.anaconda.org/conda-forge/linux-64/libnghttp2-1.68.1-h877daf1_0.conda#2a45e7f8af083626f009645a6481f12d
 https://conda.anaconda.org/conda-forge/linux-64/libedit-3.1.20250104-pl5321h7949ede_0.conda#c277e0a4d549b03ac1e9d6cbbe3d017b
 https://conda.anaconda.org/conda-forge/linux-64/keyutils-1.6.3-hb9d3cd8_0.conda#b38117a3c920364aff79f870c984b4a3
-https://conda.anaconda.org/conda-forge/linux-64/krb5-1.22.2-ha1258a1_0.conda#fb53fb07ce46a575c5d004bbc96032c2
-https://conda.anaconda.org/conda-forge/linux-64/libcurl-8.20.0-hcf29cc6_0.conda#c3cc2864f82a944bc90a7beb4d3b0e88
+https://conda.anaconda.org/conda-forge/linux-64/krb5-1.22.2-hbde042b_1.conda#54157a1c8c0bb70f62dd0b17fba7e7f2
+https://conda.anaconda.org/conda-forge/linux-64/libcurl-8.21.0-hcf29cc6_0.conda#dcd79cabd5d435f48d75db3d81cb5874
 https://conda.anaconda.org/conda-forge/linux-64/proj-9.7.1-he0df7b0_3.conda#031e33ae075b336c0ce92b14efa886c5
 https://conda.anaconda.org/conda-forge/linux-64/icu-78.3-h33c6efd_0.conda#c80d8a3b84358cb967fa81e7075fbc8a
 https://conda.anaconda.org/conda-forge/linux-64/xerces-c-3.3.0-hd9031aa_1.conda#66a1db55ecdb7377d2b91f54cd56eafa
@@ -69,17 +69,17 @@ https://conda.anaconda.org/conda-forge/linux-64/libstdcxx-ng-15.2.0-hdf11a46_19.
 https://conda.anaconda.org/conda-forge/linux-64/uriparser-0.9.8-hac33072_0.conda#d71d3a66528853c0a1ac2c02d79a0284
 https://conda.anaconda.org/conda-forge/linux-64/libkml-1.3.0-haa4a5bd_1023.conda#953b7cca897e21215302dbfe2af5cd0c
 https://conda.anaconda.org/conda-forge/linux-64/lzo-2.10-h280c20c_1002.conda#45161d96307e3a447cc3eb5896cf6f8c
-https://conda.anaconda.org/conda-forge/linux-64/libarchive-3.8.7-gpl_hc2c16d8_100.conda#dbeb5c8321cb2408d406a3da16a0ff0d
+https://conda.anaconda.org/conda-forge/linux-64/libarchive-3.8.8-gpl_hc2c16d8_100.conda#44652e646cb623f486ea72e7e7479222
 https://conda.anaconda.org/conda-forge/linux-64/json-c-0.18-h6688a6e_0.conda#38f5dbc9ac808e31c00650f7be1db93f
 https://conda.anaconda.org/conda-forge/linux-64/giflib-5.2.2-hd590300_0.conda#3bf7b9fd5a7136126e0234db4b87c8b6
 https://conda.anaconda.org/conda-forge/linux-64/geotiff-1.7.4-h1000f5c_4.conda#ff1966654a6cd1cf06a6e44c13e60b8a
 https://conda.anaconda.org/conda-forge/linux-64/snappy-1.2.2-h03e3b7b_1.conda#98b6c9dc80eb87b2519b97bcf7e578dd
 https://conda.anaconda.org/conda-forge/linux-64/blosc-1.21.6-he440d0b_1.conda#2c2fae981fd2afd00812c92ac47d023d
 https://conda.anaconda.org/conda-forge/linux-64/libgdal-core-3.10.3-h05c3bbc_24.conda#a69445ccff7ec3d60fe14110bd4d86ae
-https://conda.anaconda.org/conda-forge/noarch/click-8.3.3-pyhc90fa1f_0.conda#2266262ce8a425ecb6523d765f79b303
+https://conda.anaconda.org/conda-forge/noarch/click-8.4.1-pyhc90fa1f_0.conda#554304a07e581a85891b15e39ea9f268
 https://conda.anaconda.org/conda-forge/noarch/cligj-0.7.2-pyhd8ed1ab_2.conda#55c7804f428719241a90b152016085a1
 https://conda.anaconda.org/conda-forge/noarch/click-plugins-1.1.1.2-pyhd8ed1ab_0.conda#e9b05deb91c013e5224672a4ba9cf8d1
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diff --git a/workflow/envs/shape.osx-arm64.pin.txt b/workflow/envs/module.osx-arm64.pin.txt
similarity index 84%
rename from workflow/envs/shape.osx-arm64.pin.txt
rename to workflow/envs/module.osx-arm64.pin.txt
index b2dc58f..6ac62b6 100644
--- a/workflow/envs/shape.osx-arm64.pin.txt
+++ b/workflow/envs/module.osx-arm64.pin.txt
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@@ -195,23 +196,24 @@ https://conda.anaconda.org/conda-forge/osx-arm64/xorg-libxdmcp-1.1.5-hc919400_1.
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diff --git a/workflow/envs/shape.win-64.pin.txt b/workflow/envs/module.win-64.pin.txt
similarity index 81%
rename from workflow/envs/shape.win-64.pin.txt
rename to workflow/envs/module.win-64.pin.txt
index dd67ef8..cacd052 100644
--- a/workflow/envs/shape.win-64.pin.txt
+++ b/workflow/envs/module.win-64.pin.txt
@@ -2,47 +2,47 @@
 # platform: win-64
 @EXPLICIT
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+https://conda.anaconda.org/conda-forge/noarch/petl-1.7.19-pyhd8ed1ab_0.conda#0e5e65e0dab787e772b2d2ba3b78dfba
+https://conda.anaconda.org/conda-forge/noarch/marko-2.2.3-pyhd8ed1ab_0.conda#5765726ab7f662c4105e209ad3b542c9
+https://conda.anaconda.org/conda-forge/win-64/rpds-py-2026.5.1-py313ha9ea572_0.conda#e59ef8e278049bdcb8d8c3f2e55adaf5
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-https://conda.anaconda.org/conda-forge/noarch/platformdirs-4.9.6-pyhcf101f3_0.conda#89c0b6d1793601a2a3a3f7d2d3d8b937
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+https://conda.anaconda.org/conda-forge/noarch/platformdirs-4.10.0-pyhcf101f3_0.conda#2c5ef45db85d34799771629bd5860fd7
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-https://conda.anaconda.org/conda-forge/noarch/black-26.3.1-pyh866005b_0.conda#c7e43448266209d766a229cada982884
+https://conda.anaconda.org/conda-forge/noarch/black-26.5.1-pyh866005b_0.conda#651a8c2065be6883e86ec0e8471ed5ce
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@@ -186,23 +186,24 @@ https://conda.anaconda.org/conda-forge/win-64/xorg-libxdmcp-1.1.5-hba3369d_1.con
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-https://conda.anaconda.org/conda-forge/win-64/libfreetype6-2.14.3-hdbac1cb_0.conda#f9975a0177ee6cdda10c86d1db1186b0
-https://conda.anaconda.org/conda-forge/win-64/libfreetype-2.14.3-h57928b3_0.conda#d9f70dd06674e26b6d5a657ddd22b568
-https://conda.anaconda.org/conda-forge/win-64/lcms2-2.19.1-hf2c6c5f_0.conda#29f2c366a0da954bafd69a0d549c0ab3
+https://conda.anaconda.org/conda-forge/win-64/libfreetype6-2.14.3-hdbac1cb_1.conda#4e4d54f9f98383d977ba56ef39ebf46d
+https://conda.anaconda.org/conda-forge/win-64/libfreetype-2.14.3-h57928b3_1.conda#e45b52fb9a81c9e2708465a706e05952
+https://conda.anaconda.org/conda-forge/win-64/lcms2-2.19.1-hf2c6c5f_1.conda#1df4012c8a2478699d07bc26af66d41e
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-https://conda.anaconda.org/conda-forge/win-64/freetype-2.14.3-h57928b3_0.conda#507b36518b5a595edda64066c820a6ef
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-https://conda.anaconda.org/conda-forge/win-64/fonttools-4.62.1-py313hd650c13_0.conda#0638575ee9aaec193898033359a93d8d
+https://conda.anaconda.org/conda-forge/win-64/fonttools-4.63.0-py313hd650c13_0.conda#2b7be2be35fc3b035f1365a015af9706
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-https://conda.anaconda.org/conda-forge/win-64/scipy-1.17.1-py313he51e9a2_0.conda#f64c65352c68208b19838b537b39b02b
+https://conda.anaconda.org/conda-forge/win-64/scipy-1.18.0-py313he51e9a2_0.conda#ddf3fb8bab2ad4ffefad64803ffdbdfb
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+https://conda.anaconda.org/conda-forge/noarch/narwhals-2.22.1-pyhcf101f3_0.conda#9450fb40fb1e147d0bcbdf07cd02ca96
 https://conda.anaconda.org/conda-forge/noarch/joblib-1.5.3-pyhd8ed1ab_0.conda#615de2a4d97af50c350e5cf160149e77
-https://conda.anaconda.org/conda-forge/win-64/scikit-learn-1.8.0-np2py313h4ce4a18_1.conda#1a636c8e6f5b92fca019972db0ed348e
+https://conda.anaconda.org/conda-forge/win-64/scikit-learn-1.9.0-np2py313h4ce4a18_0.conda#7cf535df7dc3f75881d06532677f5caa
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@@ -211,20 +212,20 @@ https://conda.anaconda.org/conda-forge/noarch/folium-0.20.0-pyhd8ed1ab_0.conda#a
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-https://conda.anaconda.org/conda-forge/noarch/traitlets-5.15.0-pyhcf101f3_0.conda#4bada6a6d908a27262af8ebddf4f7492
+https://conda.anaconda.org/conda-forge/noarch/traitlets-5.15.1-pyhcf101f3_0.conda#37e3be7b6e2977d37b8fa5da229f5dc0
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 https://conda.anaconda.org/conda-forge/win-64/python-duckdb-1.2.0-py313h5813708_0.conda#b3c2cbd55b1c0a3dd723d08bbdebba06
 https://conda.anaconda.org/conda-forge/noarch/duckdb-1.2.0-h6c4a22f_0.conda#106a9ca2e65f476ff2499ba74c9e1db0
diff --git a/workflow/envs/module.yaml b/workflow/envs/module.yaml
new file mode 100644
index 0000000..57881c6
--- /dev/null
+++ b/workflow/envs/module.yaml
@@ -0,0 +1,21 @@
+name: module
+channels:
+- conda-forge
+- bioconda
+- nodefaults
+dependencies:
+- boto3 >=1.40.46
+- duckdb >=1.2.0
+- geopandas >=1.1.3
+- ipdb >=0.13.13
+- pandera-geopandas >=0.24
+- pandera-io >=0.24
+- pyarrow >=19.0.1
+- pycountry >=24.6.1
+- shapely >=2.1.1
+- numpy >=2.3.5
+- pandas >=3.0.2
+- pytz >=2026.2
+- requests >=2.33.1
+- antimeridian >=0.4.7
+- rasterio >=1.4.4
diff --git a/workflow/envs/shape.yaml b/workflow/envs/shape.yaml
deleted file mode 100644
index 21e5f99..0000000
--- a/workflow/envs/shape.yaml
+++ /dev/null
@@ -1,20 +0,0 @@
-name: shape
-channels:
-- conda-forge
-- nodefaults
-dependencies:
-- boto3 1.40.46.*
-- duckdb 1.2.0.*
-- geopandas 1.1.3.*
-- ipdb 0.13.13.*
-- pandera-geopandas 0.24.*
-- pandera-io 0.24.*
-- pyarrow 19.0.1.*
-- pycountry 24.6.1.*
-- shapely 2.1.1.*
-- numpy 2.3.5.*
-- pandas 3.0.2.*
-- pytz 2026.2.*
-- requests 2.33.1.*
-- antimeridian 0.4.7.*
-- rasterio 1.4.4.*
diff --git a/workflow/envs/shell.yaml b/workflow/envs/shell.yaml
deleted file mode 100644
index a00b07c..0000000
--- a/workflow/envs/shell.yaml
+++ /dev/null
@@ -1,6 +0,0 @@
-channels:
-  - conda-forge
-  - nodefaults
-dependencies:
-  - curl =8.17.0
-name: shell
diff --git a/workflow/rules/build.smk b/workflow/rules/build.smk
index 28e8944..8639fa3 100644
--- a/workflow/rules/build.smk
+++ b/workflow/rules/build.smk
@@ -13,7 +13,7 @@ rule build_eez:
     log:
         "<logs>/eez/build/{country}_{eez_key}.log",
     conda:
-        "../envs/shape.yaml"
+        "../envs/module.yaml"
     message:
         "{wildcards.country}: build EEZ dataset {wildcards.eez_key}."
     script:
@@ -39,7 +39,7 @@ rule build_country:
     log:
         "<logs>/scenarios/{scenario}/build_country/{country}.log",
     conda:
-        "../envs/shape.yaml"
+        "../envs/module.yaml"
     params:
         crs=lambda wc: get_crs_config(wc.scenario),
         voronoi=lambda wc: get_voronoi_eez_config(wc.scenario),
@@ -66,7 +66,7 @@ rule build_combined_area:
     log:
         "<logs>/scenarios/{scenario}/build_combined_area.log",
     conda:
-        "../envs/shape.yaml"
+        "../envs/module.yaml"
     params:
         crs=lambda wc: get_crs_config(wc.scenario),
         countries=lambda wc: sorted(
diff --git a/workflow/rules/download.smk b/workflow/rules/download.smk
index b4b3a54..0ad2068 100644
--- a/workflow/rules/download.smk
+++ b/workflow/rules/download.smk
@@ -8,7 +8,7 @@ rule download_duckdb_extensions:
         "<logs>/download_duckdb_extensions.log",
     localrule: True
     conda:
-        "../envs/shape.yaml"
+        "../envs/module.yaml"
     threads: 1
     message:
         "Downloading DuckDB extensions."
@@ -23,7 +23,7 @@ rule download_geoboundaries:
         "<logs>/geoboundaries/download/{country}_{subtype}_{release_type}.log",
     localrule: True
     conda:
-        "../envs/shape.yaml"
+        "../envs/module.yaml"
     params:
         timeouts=internal["timeouts"],
         geojson_max_obj_size_mb=get_gdal_config()["geojson_max_obj_size_mb"],
@@ -40,7 +40,7 @@ rule download_gadm:
         "<logs>/gadm/download/{country}_{subtype}.log",
     localrule: True
     conda:
-        "../envs/shape.yaml"
+        "../envs/module.yaml"
     params:
         timeouts=internal["timeouts"],
         geojson_max_obj_size_mb=get_gdal_config()["geojson_max_obj_size_mb"],
@@ -57,7 +57,7 @@ rule download_nuts:
         "<logs>/nuts/download/{subtype}_{resolution}_{year}.log",
     localrule: True
     conda:
-        "../envs/shape.yaml"
+        "../envs/module.yaml"
     params:
         timeouts=internal["timeouts"],
     message:
diff --git a/workflow/rules/harmonise.smk b/workflow/rules/harmonise.smk
index 517bdf0..925f842 100644
--- a/workflow/rules/harmonise.smk
+++ b/workflow/rules/harmonise.smk
@@ -9,7 +9,7 @@ rule harmonise_geoboundaries:
     log:
         "<logs>/geoboundaries/harmonise/{country}_{subtype}_{release_type}.log",
     conda:
-        "../envs/shape.yaml"
+        "../envs/module.yaml"
     message:
         "Harmonising '{wildcards.country}_{wildcards.subtype}_{wildcards.release_type}' dataset from geoBoundaries."
     script:
@@ -25,7 +25,7 @@ rule download_harmonised_overture:
         "<logs>/overture/download_and_harmonise/{country}_{subtype}.log",
     localrule: True
     conda:
-        "../envs/shape.yaml"
+        "../envs/module.yaml"
     params:
         version=config.get("overture_release", internal["overture_release"]),
     message:
@@ -42,7 +42,7 @@ rule harmonise_gadm:
     log:
         "<logs>/gadm/harmonise/{country}_{subtype}.log",
     conda:
-        "../envs/shape.yaml"
+        "../envs/module.yaml"
     message:
         "Harmonising '{wildcards.country}_{wildcards.subtype}' GADM dataset."
     script:
@@ -57,7 +57,7 @@ rule harmonise_nuts:
     log:
         "<logs>/nuts/harmonise/{country}_{subtype}_{year}_{resolution}.log",
     conda:
-        "../envs/shape.yaml"
+        "../envs/module.yaml"
     message:
         "Harmonising '{wildcards.country}' NUTS dataset for '{wildcards.subtype}_{wildcards.resolution}_{wildcards.year}'."
     script:
@@ -77,7 +77,7 @@ rule download_harmonised_eez:
         "<logs>/eez/download_harmonised/{eez}.log",
     localrule: True
     conda:
-        "../envs/shape.yaml"
+        "../envs/module.yaml"
     params:
         timeouts=internal["timeouts"],
     message: