Issues

• Duplicates in cov.tsv during the art_illumina seed generation generate a pd.Series instead of a scalar

  bug
  Bug

  metagenlab/MeSS#67 · Filter by author julimontoto opened on Jul 1, 2026
  

• Output true taxonomy of individual reads

  enhancement
  metagenlab/MeSS#65 · Filter by author tpillone opened on Nov 25, 2025

• Choose which sequence to circularize

  enhancement
  metagenlab/MeSS#64 · Filter by author farchaab opened on Sep 4, 2025
  

• Seperate tax and bam outputs

  enhancement
  metagenlab/MeSS#63 · Filter by author farchaab opened on Sep 4, 2025
  

• Better handling of MAGs

  bugenhancementperformance
  Feature

  metagenlab/MeSS#56 · Filter by author farchaab opened on Aug 19, 2025
  

• Recommended number of genomes for long read simulation

  bugenhancementperformance
  metagenlab/MeSS#54 · Filter by author matnguyen opened on Jul 23, 2025
  4

  

• unable to run tests

  bug
  metagenlab/MeSS#45 · Filter by author seanlu96 opened on Apr 29, 2025
  8

  

• passing specific simulator options

  documentationenhancement
  metagenlab/MeSS#44 · Filter by author seanlu96 opened on Apr 28, 2025
  2

  

• Clarification on input table structure for local FASTAs

  enhancementgood first issue
  metagenlab/MeSS#40 · Filter by author teojcryan opened on Apr 11, 2025
  5