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==================================================
Processing: alphafold2
WARNING: Skipping container verification
FATAL: Unable to push image to library: upload image blob failed: Patch "https://registry.sylabs.io/v2/man4ishg/omnibioai/alphafold2/blobs/uploads/86ac124e-1342-4b0d-8e6f-01b8dbc868eb?_state=xsbgR2OSW53qvdReJkbM7wbL7VpgtONkeY3d_IJ13Kt7Ik5hbWUiOiJtYW40aXNoZy9vbW5pYmlvYWkvYWxwaGFmb2xkMiIsIlVVSUQiOiI4NmFjMTI0ZS0xMzQyLTRiMGQtOGU2Zi0wMWI4ZGJjODY4ZWIiLCJPZmZzZXQiOjIwNDQ3MjMyMDAsIlN0YXJ0ZWRBdCI6IjIwMjYtMDMtMzBUMDY6NDE6MzRaIn0%3D": context canceled
Error for command "build": unknown flag: --docker-archive
Options for build command:
--arch string architecture for remote build (default "arm64")
--authfile string Docker-style authentication file to use
for writing/reading OCI registry credentials
-B, --bind strings a user-bind path specification. spec has
the format src[:dest[:opts]],where src and
dest are outside and inside paths. If dest
is not given,it is set equal to src. Mount
options ('opts') may be specified as
'ro'(read-only) or 'rw' (read/write, which
is the default).Multiple bind paths can be
given by a comma separated list. (not
supported with remote build)
--build-arg strings provide value to replace {{ variable }}
entries in build definition file, in
variable=value format
--build-arg-file string specifies a file containing variable=value
lines to replace '{{ variable }}' with
value in build definition files
--builder string remote Build Service URL, setting this
implies --remote
-d, --detached submit build job and print build ID (no
real-time logs and requires --remote)
--disable-cache do not use cache or create cache
--docker-host string specify a custom Docker daemon host
--docker-login login to a Docker Repository interactively
-e, --encrypt build an image with an encrypted file system
-f, --fakeroot build using user namespace to fake root
user (requires a privileged installation)
--fix-perms ensure owner has rwX permissions on all
container content for oci/docker sources
-F, --force overwrite an image file if it exists
-h, --help help for build
--json interpret build definition as JSON
--keep-layers Keep layers when creating an OCI-SIF. Do
not squash to a single layer.
--library string container Library URL
--mount stringArray a mount specification e.g.
'type=bind,source=/opt,destination=/hostopt'.
--no-cleanup do NOT clean up bundle after failed build,
can be helpful for debugging
--no-https use http instead of https for docker://
oras:// and library://<hostname>/... URIs
--no-oci Launch container with native runtime
--no-setgroups disable setgroups when entering --fakeroot
user namespace
-T, --notest build without running tests in %test section
--nv inject host Nvidia libraries during build
for post and test sections (not supported
with remote build)
--nvccli use nvidia-container-cli for GPU setup
(experimental)
--oci Launch container with OCI runtime
(experimental)
--passphrase prompt for an encryption passphrase
--pem-path string enter an path to a PEM formatted RSA key
for an encrypted container
-r, --remote build image remotely (does not require root)
--rocm inject host Rocm libraries during build
for post and test sections (not supported
with remote build)
-s, --sandbox build image as sandbox format (chroot
directory structure)
--section strings only run specific section(s) of deffile
(setup, post, files, environment, test,
labels, none) (default [all])
-u, --update run definition over existing container
(skips header)
--writable-tmpfs during the %test section, makes the file
system accessible as read-write with non
persistent data (with overlay support only)
Run 'singularity --help' for more detailed usage information.
open /tmp/alphafold2.tar: no such file or directory
Error response from daemon: No such image: alphafold2:latest
The push refers to repository [ghcr.io/man4ishg/omnibioai/alphafold2]
An image does not exist locally with the tag: ghcr.io/man4ishg/omnibioai/alphafold2
[FAILED] alphafold2
==================================================
Processing: atacqc
WARNING: Skipping container verification
FATAL: Unable to push image to library: error making request to server:
Get "https://library.sylabs.io/v1/entities/man4ishg": context canceled
Error for command "build": unknown flag: --docker-archive
Options for build command:
--arch string architecture for remote build (default "arm64")
--authfile string Docker-style authentication file to use
for writing/reading OCI registry credentials
-B, --bind strings a user-bind path specification. spec has
the format src[:dest[:opts]],where src and
dest are outside and inside paths. If dest
is not given,it is set equal to src. Mount
options ('opts') may be specified as
'ro'(read-only) or 'rw' (read/write, which
is the default).Multiple bind paths can be
given by a comma separated list. (not
supported with remote build)
--build-arg strings provide value to replace {{ variable }}
entries in build definition file, in
variable=value format
--build-arg-file string specifies a file containing variable=value
lines to replace '{{ variable }}' with
value in build definition files
--builder string remote Build Service URL, setting this
implies --remote
-d, --detached submit build job and print build ID (no
real-time logs and requires --remote)
--disable-cache do not use cache or create cache
--docker-host string specify a custom Docker daemon host
--docker-login login to a Docker Repository interactively
-e, --encrypt build an image with an encrypted file system
-f, --fakeroot build using user namespace to fake root
user (requires a privileged installation)
--fix-perms ensure owner has rwX permissions on all
container content for oci/docker sources
-F, --force overwrite an image file if it exists
-h, --help help for build
--json interpret build definition as JSON
--keep-layers Keep layers when creating an OCI-SIF. Do
not squash to a single layer.
--library string container Library URL
--mount stringArray a mount specification e.g.
'type=bind,source=/opt,destination=/hostopt'.
--no-cleanup do NOT clean up bundle after failed build,
can be helpful for debugging
--no-https use http instead of https for docker://
oras:// and library://<hostname>/... URIs
--no-oci Launch container with native runtime
--no-setgroups disable setgroups when entering --fakeroot
user namespace
-T, --notest build without running tests in %test section
--nv inject host Nvidia libraries during build
for post and test sections (not supported
with remote build)
--nvccli use nvidia-container-cli for GPU setup
(experimental)
--oci Launch container with OCI runtime
(experimental)
--passphrase prompt for an encryption passphrase
--pem-path string enter an path to a PEM formatted RSA key
for an encrypted container
-r, --remote build image remotely (does not require root)
--rocm inject host Rocm libraries during build
for post and test sections (not supported
with remote build)
-s, --sandbox build image as sandbox format (chroot
directory structure)
--section strings only run specific section(s) of deffile
(setup, post, files, environment, test,
labels, none) (default [all])
-u, --update run definition over existing container
(skips header)
--writable-tmpfs during the %test section, makes the file
system accessible as read-write with non
persistent data (with overlay support only)
Run 'singularity --help' for more detailed usage information.
open /tmp/atacqc.tar: no such file or directory
Error response from daemon: No such image: atacqc:latest
The push refers to repository [ghcr.io/man4ishg/omnibioai/atacqc]
An image does not exist locally with the tag: ghcr.io/man4ishg/omnibioai/atacqc
[FAILED] atacqc
==================================================
Processing: augustus
WARNING: Skipping container verification