Fix core command inventory namespacing

Assisted-by: GitHub Copilot (model: GPT-5.6, autonomous)

Co-authored-by: nicolehaugen <10600161+nicolehaugen@users.noreply.github.com>

Author: Copilot

src/specify_cli/core/__init__.py

@@ -281,6 +281,7 @@ def _normalize_description(raw: Any, *, kind: str, name: str, source_path: str)
 def _build_command_entry(name: str, layout: _CoreLayout) -> dict[str, Any]:
     file_path = layout.commands_dir / f"{name}.md"
     source_path = _package_relative(layout.command_source_path(name))
+    logical_name = f"speckit.{name}"
     if not file_path.is_file():
         raise CoreInventoryError(
             error="core_inventory.missing_file",
@@ -327,8 +328,8 @@ def _build_command_entry(name: str, layout: _CoreLayout) -> dict[str, Any]:
         frontmatter.get("handoffs"), name=name, source_path=source_path
     )
     return {
-        "id": f"core:_:command:{name}",
-        "name": name,
+        "id": f"core:_:command:{logical_name}",
+        "name": logical_name,
         "description": description,
         "sourcePath": source_path,
         "artifact": artifact,

tests/test_core_inventory.py

@@ -170,7 +170,7 @@ def test_parse_command_frontmatter_rejects_non_mapping(tmp_path: Path) -> None:
 def test_build_command_entries_uses_typed_empty_defaults(well_formed_layout: Path, override_layout) -> None:
     override_layout(well_formed_layout)
     inv = build_core_inventory()
-    alpha = next(c for c in inv["commands"] if c["name"] == "alpha")
+    alpha = next(c for c in inv["commands"] if c["name"] == "speckit.alpha")
     # alpha.md declares only `description:` — everything else must default.
     assert alpha["artifact"] is None
     assert alpha["optional"] is False
@@ -180,7 +180,7 @@ def test_build_command_entries_uses_typed_empty_defaults(well_formed_layout: Pat
 def test_build_command_handoffs_flatten_agent_field(well_formed_layout: Path, override_layout) -> None:
     override_layout(well_formed_layout)
     inv = build_core_inventory()
-    beta = next(c for c in inv["commands"] if c["name"] == "beta")
+    beta = next(c for c in inv["commands"] if c["name"] == "speckit.beta")
     # beta.md's handoffs are mappings with `agent:` — we surface only agent ids.
     assert beta["handoffs"] == ["alpha", "alpha"]