Test & Lint Python

fix: use missing_ok=True in extension ZIP cleanup #6683

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Run time

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Job	Run time
ruff	11s
pytest (windows-latest, 3.14)	11m 18s
pytest (windows-latest, 3.13)	8m 56s
pytest (ubuntu-latest, 3.13)	4m 51s
pytest (ubuntu-latest, 3.14)	6m 26s
pytest (macos-latest, 3.13)	6m 5s
pytest (macos-latest, 3.14)	5m 26s
	43m 13s