From d50972595dae4c3aef010df70ae153b472201406 Mon Sep 17 00:00:00 2001 From: Nils Homer Date: Fri, 27 Mar 2026 22:32:55 -0400 Subject: [PATCH] chore: release v0.3.0 --- CHANGELOG.md | 20 ++++++++++++++++++++ Cargo.lock | 2 +- Cargo.toml | 2 +- 3 files changed, 22 insertions(+), 2 deletions(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index 0a73bf8..3e171f3 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -7,6 +7,26 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0 ## [Unreleased] +## [0.3.0](https://github.com/fulcrumgenomics/ref-solver/compare/v0.2.0...v0.3.0) - 2026-03-28 + +### Added + +- stream binary uploads to read only headers from BAM/CRAM files ([#18](https://github.com/fulcrumgenomics/ref-solver/pull/18)) +- show upload size limit and header extraction info in web UI +- extract BAM headers client-side before upload +- cap binary file uploads at 4MB for header-only parsing +- add reader-based BAM/CRAM header parsing functions +- normalize space-separated SAM headers in web UI ([#13](https://github.com/fulcrumgenomics/ref-solver/pull/13)) +- add refget integration for unknown contig lookup ([#9](https://github.com/fulcrumgenomics/ref-solver/pull/9)) + +### Other + +- replace stringly-typed error_type with enum ([#16](https://github.com/fulcrumgenomics/ref-solver/pull/16)) +- update fulcrum genomics logo with light/dark theme support ([#17](https://github.com/fulcrumgenomics/ref-solver/pull/17)) +- simplify headerExtractor, fix review findings +- add integration tests for reader-based BAM header parsing +- use reader-based parsing for BAM/CRAM, eliminate temp files + ## [0.2.0](https://github.com/fulcrumgenomics/ref-solver/compare/v0.1.0...v0.2.0) - 2026-03-17 ### Added diff --git a/Cargo.lock b/Cargo.lock index 9c3e93a..cd33e22 100644 --- a/Cargo.lock +++ b/Cargo.lock @@ -1607,7 +1607,7 @@ dependencies = [ [[package]] name = "ref-solver" -version = "0.2.0" +version = "0.3.0" dependencies = [ "anyhow", "assert_cmd", diff --git a/Cargo.toml b/Cargo.toml index 0675a1e..cc0c439 100644 --- a/Cargo.toml +++ b/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "ref-solver" -version = "0.2.0" +version = "0.3.0" edition = "2021" authors = ["Fulcrum Genomics"] description = "Solve reference genome identification from BAM/SAM headers"