Percentage-based biomarkers values are parsed as absolute values

[acecilia]

Hi 👋

First of all: thanks for this incredible tool. I was dreaming about something like 10% what this tool does, incredible!

I wanted to report a parsing error, where percentage-based biomarkers are being imported as absolute values. I tried to debug it, but I cannot find anything wrong with the information sent to the AI.

This is the PDF content:

This is what is sent to AI:

This is what I receive back:

If you pay attention, the mapping for the percentage-base values in the square box is as follows:

• differential.lymphocytes
• differential.monocytes

But I would expect the mapping to be done to:

• differential.lymphocytesPct
• differential.monocytesPct

Thanks!

[acecilia]

Editing what gets sent to AI from:

Neutrophils %  51.1  %  Flowcytometery
Lymphocytes %  36.80  %  Flowcytometery
Monocytes %  7.40  %  Flowcytometery
Eosinophils %  4.10  %  Flowcytometery
Basophils %  0.6  %  Flowcytometery

To:

Neutrophils_PERCENTAGE  51.1%  PERCENTAGE  Flowcytometery
Lymphocytes_PERCENTAGE  36.80%  PERCENTAGE  Flowcytometery
Monocytes_PERCENTAGE  7.40%  PERCENTAGE  Flowcytometery
Eosinophils_PERCENTAGE  4.10%  PERCENTAGE  Flowcytometery
Basophils_PERCENTAGE  0.6%  PERCENTAGE  Flowcytometery

Surprisingly works for some values, but not for others:

[elkimek]

Hi, welcome and thanks for reporting this. Should be fixed, can you test and report back?