Repair canonical_transcripts#156

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EFraim wants to merge 5 commits into

daler:v0.11from

Commits on Mar 2, 2020

gffutils.feature expects Sequence objects from pyfaidx, not raw strings
evgeny
committed
Only take CDS length into account when it exists (otherwise uncomparable elements such as Features might get into play)
evgeny
committed
key argument name must be explicitly specified in Python3.6+
evgeny
committed
Use only CDS exons if CDS exists and don't assume sorting. Tested against Ensembl GFFs
evgeny
committed

Commits on Jan 25, 2022

Merge branch 'github-actions' into efraim-master
daler
committed