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docs/HPC_GUIDE.md

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@@ -48,7 +48,7 @@ watch -n 10 "ls -1 results_JOBID | wc -l"
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# Fetching the results once the job is done
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scp -r kanagnostopoul@snellius.surf.nl:~/CSS_Project/results/phase3_18743295/ ./results/
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scp -r kanagnostopoul@snellius.surf.nl:~/CSS_Project/results/phase3_18744380/ ./results/
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```
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The jobscript template can be found in ```run_analysis.sh``` (default rome paritition).

models/config.py

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@@ -80,7 +80,7 @@ class Config:
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# Critical point (UPDATE AFTER PHASE 1)
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critical_prey_birth: float = 0.20
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critical_prey_death: float = 0.963
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critical_prey_death: float = 0.947
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# Prey parameter sweep (Phase 1)
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prey_death_range: Tuple[float, float] = (0.0, 0.2)
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warmup_steps=1000,
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measurement_steps=1000,
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critical_prey_birth=0.20, # Add explicitly
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critical_prey_death=0.116, # Add explicitly - verify from Phase 1!
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critical_prey_death=0.947, # Add explicitly - verify from Phase 1!
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collect_pcf=True,
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pcf_sample_rate=1.0,
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save_timeseries=False,

notebooks/kimon.ipynb

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