MUFFIN : A suite of generic tools for the analysis of count-based sequencing data
This is the code repository for the research paper MUFFIN : A suite of generic tools for the analysis of count-based sequencing data by de Langen et al.
All details on how to reproduce our results and how to re-use some parts of our code is in xxx. It containts the following sections :
This project is licensed under the GPL-3.0 license. See the LICENSE.md file in the repository for more details.
This work was supported with ; PhD Fellowship to P.D.L. from the French Ministry of Higher Education and Research (MESR); Institut National de la Santé et de la Recherche Médicale (INSERM); The Core Cluster of the Institut Français de Bioinformatique (IFB) (ANR-11-INBS-0013). The results shown here are based upon data generated by the TCGA Research Network: https://www.cancer.gov/tcga, the GTEx project, the ENCODE Consortium, the ENCODE production laboratories, and independent laboratories who followed the Open Science principles and submitted raw ChIP-seq data into repositories.