Hi I have a question about the ebGSEA algorithm. From the documentation I'm reading and from the results I'm seeing, it seems that the ebGSEA accounts for the bias induced by multiple probes mapping a gene, but the pathway analysis does not account for the regional clustering of genes belonging to particular pathways.
Is that correct? If so, how to you recommend to further deal with that bias in the ebGSEA results?
Hi I have a question about the ebGSEA algorithm. From the documentation I'm reading and from the results I'm seeing, it seems that the ebGSEA accounts for the bias induced by multiple probes mapping a gene, but the pathway analysis does not account for the regional clustering of genes belonging to particular pathways.
Is that correct? If so, how to you recommend to further deal with that bias in the ebGSEA results?