module 'fasta' has no attribute 'fasta'

[Bathroomboss]

Hi adebali :
These days I tried to run XRseq's pipeline (XR-seq-basics.sh) line by line.
When run line 46 -- echo "Get the dinucleotide content of the reads" and use fa2kmerAbundanceTable.py,
An AttributeError: module 'fasta' has no attribute 'fasta' was happen.
so i try to understand the "fasta" package , but i didn't find any contents in this package named 'fasta' or 'getKmerAbundance' which are
in the fa2kmerAbundanceTable.py.
I am not sure that if the "fasta"package downloaded from https://pypi.org/project/fasta/ is ture and where can i download the ture package?

[adebali]

Hi @Bathroomboss

Here is the fasta module: https://github.com/adebali/NGStoolkit/blob/master/bin/utils/fasta.py

If you run setup.sh as in the readme.md, you should not get any problem.