LoopAlgorithmToPythonTidepool/linux_setup.sh at main · Sigridtt/LoopAlgorithmToPythonTidepool · GitHub

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#!/bin/bash

# Install swift
wget https://download.swift.org/swift-6.0.3-release/ubuntu2404/swift-6.0.3-RELEASE/swift-6.0.3-RELEASE-ubuntu24.04.tar.gz

tar xzf swift-6.0.3-RELEASE-ubuntu24.04.tar.gz
sudo mv swift-6.0.3-RELEASE-ubuntu24.04 /usr/local/swift
rm swift-6.0.3-RELEASE-ubuntu24.04.tar.gz

export PATH="/usr/local/swift/usr/bin:$PATH"

# Install libc
sudo apt update
sudo apt install -y build-essential libc6-dev

# Install conda
wget https://repo.anaconda.com/miniconda/Miniconda3-latest-Linux-x86_64.sh
bash Miniconda3-latest-Linux-x86_64.sh -b
~/miniconda3/bin/conda init

export PATH="$HOME/miniconda3/bin:$PATH"

# Source the conda configuration to make it available in current session
source ~/miniconda3/etc/profile.d/conda.sh

# Install repos
mkdir swift_loop_linux
cd swift_loop_linux/

git clone https://github.com/tidepool-org/LoopAlgorithmToPython.git
cd LoopAlgorithmToPython
git checkout dev
./build.sh

cd ../

git clone https://github.com/tidepool-org/data-science-simulator.git
cd data-science-simulator
git checkout dev

conda env create -f conda-environment-swift.yml

mkdir -p ~/data/simulator/processed_data/insulin_algorithm_testing_framework/510k_short_run/
mkdir -p ~/data/simulator/processed/icgm/

# Set environment and run
conda activate tidepool-data-science-simulator-swift
export PYTHONPATH=.
python tidepool_data_science_simulator/projects/swift_api/swift_loop_example.py