Upgrade fixtures: 1.0.0

v1.0.0 is published but was missing from RELEASES and had no fixture, so
the 1.0.0 -> 1.0.1 upgrade was not covered. Generated with
`node scripts/generate-upgrade-fixtures.mjs v1.0.0` by the 1.0.0 engine
itself (schema 27, the same as 1.0.1); the ignored secrets.env, log and
last-workspace files are not committed, as for the earlier fixtures.
upgrade_fixtures: 3 passed.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

Author: ShadowfetchStudio

native/core/tests/fixtures/upgrade/1.0.0/manifest.json

@@ -0,0 +1,70 @@
+{
+  "automation_id": "af3203293c3d47afa306e2b3a67045a7",
+  "automation_run_id": "7541670eb60c488c9914721cf0947dbb",
+  "branch_session_id": "6ecea44d22214c9a8bbb56fba9b3f7a3",
+  "compare_id": "c0ffee00c0ffee00c0ffee00c0ffee00",
+  "editor_draft": {
+    "path": "README.md",
+    "revision": "9afc7798655b4c1793d1328b6ec28e45"
+  },
+  "files": [
+    "config/config.yaml",
+    "config/secrets.env",
+    "state/last-workspace.txt",
+    "state/logs/shadowcode.log"
+  ],
+  "goal_id": "fe5fcccffa6348cabbbca682b4907357",
+  "jobs": [
+    {
+      "id": "6e7fab32395245ab8b9ef3de4e718ccc",
+      "status": "completed",
+      "task_id": "fe202c710d774f8b8e7ee48610050388"
+    },
+    {
+      "id": "71a8581e8d6d47dba86832ab6a9d067d",
+      "status": "completed",
+      "task_id": "ee49e62fcb204993bc89813964491f2c"
+    }
+  ],
+  "paused_automation_id": "f834aac85420444582c0fac4013db658",
+  "pin_id": 1,
+  "project_note": "Fixture project note",
+  "row_counts": {
+    "automation_runs": 1,
+    "automations": 2,
+    "background_processes": 0,
+    "desktop_jobs": 5,
+    "editor_drafts": 1,
+    "events": 141,
+    "file_changes": 1,
+    "goal_runs": 1,
+    "goals": 2,
+    "job_messages": 29,
+    "milestones": 4,
+    "models": 0,
+    "native_meta": 4,
+    "pins": 2,
+    "projects": 1,
+    "queued_tasks": 0,
+    "session_meta": 6,
+    "sessions": 5,
+    "task_notes": 1,
+    "tasks": 5,
+    "usage_snapshots": 1
+  },
+  "run_goal_id": "115f7dd055ab4374869886c639f28b6f",
+  "schema_version": 27,
+  "second_session_id": "dd385e88575e45a2a39b8329ffc587f4",
+  "session_id": "403415b9c7ac4dbba4363aae7d0ccfac",
+  "skipped": [],
+  "task_note": {
+    "note": "Fixture task note",
+    "task_id": "fe202c710d774f8b8e7ee48610050388"
+  },
+  "usage_snapshot": {
+    "account": "fixture@example.invalid",
+    "pool": "primary",
+    "vendor": "codex"
+  },
+  "version": "1.0.0"
+}

native/core/tests/fixtures/upgrade/1.0.0/profile/config/config.yaml

@@ -0,0 +1,144 @@
+model:
+  default: mock
+  provider: local
+  endpoint: http://127.0.0.1:34591/v1
+  api_key_env: SHADOWCODE_FIXTURE_KEY
+  name: fixture-coder
+  context_limit: 16384
+  keep_alive: 30m
+permissions:
+  mode: allow_edits
+  level: workspace
+  require_approval_for_dangerous: true
+  network: false
+  allow_root: false
+  approve_shell: false
+agent:
+  max_steps: 12
+  tool_timeout_sec: 60
+  parallel_reads: true
+  compact_ratio: 0.7
+  model_retries: 3
+  retry_backoff_sec: 1.0
+  max_fix_retries: 3
+  max_output_bytes: 256000
+  max_task_tokens: 1000000
+  autonomy_profile: normal
+  summary_compaction: true
+  summary_timeout_sec: 60
+  stuck_check: true
+ui:
+  notify: false
+  notify_approval: true
+  notify_failed: true
+  notify_finished: true
+  notify_limit: true
+  notify_sound: false
+  theme: dark
+onboarding:
+  completed: true
+  workspace: @ROOT@/project
+routing:
+  architecture: ''
+  coder: ''
+  enabled: false
+  local: ''
+  planner: ''
+  reviewer: ''
+  small_edits: ''
+  tester: ''
+  vision: ''
+mcp:
+  approved: []
+  servers: []
+  share_with_cli_agents: true
+hooks:
+  approved: []
+verification:
+  commands: []
+trusted_workspaces:
+- @ROOT@/project
+guardian:
+  allow_prepare_patch: false
+  enabled: false
+  interval_sec: 3600
+cli_agents:
+  enabled: true
+  claude_enabled: true
+  codex_binary: codex
+  grok_binary: grok
+  claude_binary: claude
+  cursor_binary: cursor-agent
+  antigravity_binary: agy
+  approval_timeout_sec: 600
+  stall_timeout_sec: 900
+  max_run_time_sec: 7200
+local_engine:
+  directories: []
+  files: []
+  imports: []
+  excluded: []
+  llama_binary: ''
+  context_size: 0
+network:
+  mode: online
+  shell: on
+  allow: []
+  allow_local_dev: []
+  searxng_url: ''
+sandbox:
+  require: false
+  home_binds:
+  - .cargo
+  - .rustup
+  - .nvm
+  - .npm
+  - .cache/pip
+  - .local/bin
+  - .gitconfig
+  - .pyenv
+  - .bun
+  - .deno
+  landlock: true
+checkpoints:
+  shell: true
+  vendor: true
+  keep: 200
+  max_copy_files: 5000
+  max_copy_bytes: 67108864
+limits:
+  fallback_model: ''
+  on_limit: local
+spending:
+  task_usd: 1.0
+  daily_usd: 10.0
+logging:
+  level: info
+updates:
+  check: null
+a_setting_from_the_future:
+  kept: true
+code_intel:
+  diagnostics_on_edit: true
+  diagnostics_wait_ms: 3000
+  embedding_model: ''
+  lsp: true
+  lsp_idle_minutes: 10
+  max_servers: 4
+  repo_map_tokens: 1024
+  semantic_search: true
+  servers: {}
+subagents:
+  enabled: true
+  max_depth: 1
+  max_parallel: 4
+  max_per_task: 16
+  max_turns: 24
+voice:
+  engine: local
+  language: en
+  live_preview: true
+  max_seconds: 120
+  model: base.en
+  openrouter_model: google/gemini-3.1-flash-lite
+  voice_commands: true