entrypoint-dev.sh

#!/bin/sh
set -e

# SYSTEM OPTIONS (set on Docker build)
RNACENTRAL_HOME=$RNACENTRAL_HOME

# External database settings
DB_HOST=${DB_HOST:-'hh-pgsql-public.ebi.ac.uk'}
DB_NAME=${DB_NAME:-'pfmegrnargs'}
DB_USER=${DB_USER:-'reader'}
DB_PORT=${DB_PORT:-'5432'}
DB_PASSWORD=${DB_PASSWORD:-'NWDMCE5xdipIjRrp'}

# RNAcentral specific settings
SECRET_KEY=${SECRET_KEY:-$(python -c 'from django.core.management.utils import get_random_secret_key; print(get_random_secret_key())')}
DJANGO_DEBUG=${DJANGO_DEBUG:-'False'}
EBI_SEARCH_ENDPOINT=${EBI_SEARCH_ENDPOINT:-'http://www.ebi.ac.uk/ebisearch/ws/rest/rnacentral'}
S3_HOST=${S3_HOST}
S3_KEY=${S3_KEY}
S3_SECRET=${S3_SECRET}

# Add local_settings file
if [ -f "${RNACENTRAL_HOME}"/rnacentral/rnacentral/local_settings.py ]
then
	echo "INFO: RNAcentral local_settings.py file already provisioned"
else
	echo "INFO: Creating RNAcentral local_settings.py file"
	cat <<-EOF > "${RNACENTRAL_HOME}"/rnacentral/rnacentral/local_settings.py
		import os
		from .utils import get_environment
		SECRET_KEY = "$SECRET_KEY"
		EBI_SEARCH_ENDPOINT = "$EBI_SEARCH_ENDPOINT"
		ENVIRONMENT = get_environment()
		INTERNAL_IPS = ('127.0.0.1', '192.168.99.1')
		DEBUG_TOOLBAR_CONFIG = {'SHOW_TOOLBAR_CALLBACK': lambda request: DEBUG}
		S3_SERVER = {
        "HOST": "$S3_HOST",
        "KEY": "$S3_KEY",
        "SECRET": "$S3_SECRET",
        "BUCKET": "ebi-rnacentral",
    }
		CACHES = {
        "default": {
            "BACKEND": "django.core.cache.backends.memcached.PyMemcacheCache",
            "LOCATION": "memcached:11211",
        },
        "sitemaps": {
            "BACKEND": "rnacentral.utils.cache.SitemapsCache",
            "LOCATION": os.path.join(os.path.dirname(os.path.dirname(os.path.dirname(os.path.abspath(__file__)))), 'rnacentral', 'sitemaps')
        }
    }
		# Override cache settings for testing
		import sys
		if 'test' in sys.argv or 'pytest' in sys.modules:
		    CACHES = {
		        "default": {
		            "BACKEND": "django.core.cache.backends.locmem.LocMemCache",
		            "LOCATION": "test-cache",
		        },
		        "sitemaps": {
		            "BACKEND": "django.core.cache.backends.locmem.LocMemCache",
		            "LOCATION": "test-sitemaps-cache",
		        }
		    }
		DATABASES = {
        "default": {
            "ENGINE": "django.db.backends.postgresql_psycopg2",
            "NAME": "$DB_NAME",
            "USER": "$DB_USER",
            "PASSWORD": "$DB_PASSWORD",
            "HOST": "$DB_HOST",
            "PORT": "$DB_PORT",
            "CONN_MAX_AGE": 0
        }
    }
		# Use regular StaticFilesStorage to avoid manifest issues
		STATICFILES_STORAGE = 'django.contrib.staticfiles.storage.StaticFilesStorage'
	EOF
	sed -i "3 a DEBUG = ${DJANGO_DEBUG}" "${RNACENTRAL_HOME}"/rnacentral/rnacentral/local_settings.py
	chown -R rnacentral "${RNACENTRAL_HOME}"/rnacentral/rnacentral/local_settings.py
fi

# Clean up any problematic source map files before collecting static files
echo "INFO: Cleaning up problematic source map files..."
find "${RNACENTRAL_HOME}" -name "*.map" -type f -exec rm -f {} \; 2>/dev/null || true

echo "INFO: Collecting static files..."
python "${RNACENTRAL_HOME}"/rnacentral/manage.py collectstatic --noinput --clear

# Run django compressor only if enabled
echo "INFO: Checking django compressor settings..."
COMPRESS_ENABLED=$(python "${RNACENTRAL_HOME}"/rnacentral/manage.py shell -c "from django.conf import settings; print(getattr(settings, 'COMPRESS_ENABLED', False))")
if [ "$COMPRESS_ENABLED" = "True" ]; then
    echo "INFO: Running django compress"
    python "${RNACENTRAL_HOME}"/rnacentral/manage.py compress
else
    echo "INFO: Django compressor is disabled, skipping compression"
fi

exec "$@"