deps: Bump the python-minor-and-patch group across 1 directory with 3 updates

Bumps the python-minor-and-patch group with 3 updates in the / directory: [numpy](https://github.com/numpy/numpy), [ty](https://github.com/astral-sh/ty) and [pymdown-extensions](https://github.com/facelessuser/pymdown-extensions).


Updates `numpy` from 2.5.0 to 2.5.1
- [Release notes](https://github.com/numpy/numpy/releases)
- [Changelog](https://github.com/numpy/numpy/blob/main/doc/RELEASE_WALKTHROUGH.rst)
- [Commits](numpy/numpy@v2.5.0...v2.5.1)

Updates `ty` from 0.0.55 to 0.0.56
- [Release notes](https://github.com/astral-sh/ty/releases)
- [Changelog](https://github.com/astral-sh/ty/blob/main/CHANGELOG.md)
- [Commits](astral-sh/ty@0.0.55...0.0.56)

Updates `pymdown-extensions` from 11.0 to 11.0.1
- [Release notes](https://github.com/facelessuser/pymdown-extensions/releases)
- [Commits](facelessuser/pymdown-extensions@11.0...11.0.1)

---
updated-dependencies:
- dependency-name: numpy
  dependency-version: 2.5.1
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: python-minor-and-patch
- dependency-name: ty
  dependency-version: 0.0.56
  dependency-type: direct:development
  update-type: version-update:semver-patch
  dependency-group: python-minor-and-patch
- dependency-name: pymdown-extensions
  dependency-version: 11.0.1
  dependency-type: direct:development
  update-type: version-update:semver-patch
  dependency-group: python-minor-and-patch
...

Signed-off-by: dependabot[bot] <support@github.com>

Author: dependabot[bot]